- Transcript 'Cisavi.CG.ENS81.R166...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S63.g01476.01.t
Possible name(s)
THBS1; THBS2; THBS3
Gene model
Location
S63 [47,045 / 54,724]
Amino acid sequence
Length: 656
>Haaura.CG.MTP2014.S63.g01476.01.p
LHGGKPCAGDSGQIESCIEKSCPINTCRKHPCYRGVTCTPFDDGTFVCGSCPEGMQGNGI
KCIDIDECSLVPDACFHYEDKHRCQNQHGGYICLPCPEGYKGTRPSGVGVEYATEHKQQC
KISNPCTDGSNPCPGNSECIYLDPTMSPPFMCKCHPGFSACPSCKGLVCSEDSDLDGWPD
QEASCERENATIKCHMDNCPTLPNSGQENADKDDEGDACDLDDDDDGVQDARDNCPLSFN
PTQYDSDDDRVGDVCDNCPFLRNPGQIDTDGDGLGDDCDPDLDGDDILNGEDNCKYVSNK
EQKDRDSDGVGDECDNCPKVENRDQGDIDDDLVGDACDTDRDRDMDGWQDNRDNCPFIAN
SAQTDHDQDGIGDSCDPDDDDDGILDEEDNCRLIFNPDQLDTDGNGRGDVCEHDFDGDGV
PDFEDACYANAKIQKTDFSVFDRVKLDPSGTAQIDPNWVIRHKGKEIIQTVNCDPGLAIS
RDTFEGVDFDGTFFVNTGNDDDYAGFVFGYQSSSRFYVLMWKQVSQSYWKSYPSHAMGMA
GLQLKVVESKTGPGEELRNALWHTGDTAGQVRTLWQDPTSQGWNNHNAYRWRLNHRPSTG
EIRVVMHKGKDLLVDSGRIVDKTYAGGRMGMFIFSQEMVFYSDMEYKCNDAPIEY*
Nucleotide sequence
Length: 2,398
>Haaura.CG.MTP2014.S63.g01476.01.t
CTGCATGGAGGCAAGCCGTGTGCCGGCGATTCAGGACAAATCGAAAGTTGCATCGAAAAG
TCATGTCCAATTAACACATGTCGAAAACATCCGTGTTATCGTGGAGTTACTTGTACACCT
TTTGACGACGGAACTTTCGTATGCGGATCCTGTCCGGAAGGAATGCAGGGAAATGGAATC
AAATGCATTGACATTGATGAGTGCTCATTGGTACCAGACGCGTGTTTCCACTACGAAGAT
AAACACAGATGCCAAAATCAGCACGGCGGTTATATTTGCTTGCCTTGCCCAGAAGGATAC
AAAGGAACAAGACCAAGCGGTGTTGGAGTGGAATATGCAACGGAACATAAGCAACAATGC
AAGATATCCAACCCGTGCACAGACGGTTCAAACCCTTGTCCCGGAAATTCAGAATGCATT
TACCTGGATCCCACCATGTCGCCACCATTTATGTGCAAGTGTCACCCTGGATTCTCTGCC
TGCCCCTCTTGCAAAGGATTAGTTTGCTCCGAAGATAGTGATTTAGACGGATGGCCTGAT
CAAGAGGCATCGTGTGAAAGGGAAAACGCAACCATAAAATGTCATATGGACAACTGTCCC
ACTCTGCCTAACAGCGGCCAAGAAAACGCTGACAAGGATGACGAAGGAGACGCGTGCGAT
TTAGACGATGATGATGACGGAGTGCAAGACGCCAGAGACAACTGTCCCCTCAGTTTCAAC
CCAACTCAATACGACAGTGATGACGACAGAGTGGGTGATGTCTGTGACAACTGCCCGTTT
TTGCGTAACCCAGGACAAATCGACACAGACGGTGACGGACTAGGCGACGATTGTGATCCA
GATCTTGATGGAGATGATATTCTTAATGGGGAGGATAACTGCAAATACGTCAGTAATAAG
GAGCAGAAGGATAGAGATTCGGACGGAGTCGGAGACGAGTGTGACAATTGCCCCAAGGTT
GAAAACAGAGATCAAGGCGATATTGATGACGATTTAGTCGGAGATGCGTGCGATACTGAC
AGAGACAGAGATATGGATGGATGGCAAGACAACCGAGATAACTGCCCATTCATAGCGAAC
AGCGCACAAACAGACCATGACCAGGACGGCATAGGTGACAGTTGCGACCCTGATGATGAT
GACGATGGTATTTTGGACGAGGAGGACAATTGTAGACTCATCTTCAATCCAGATCAATTA
GATACAGACGGAAACGGACGAGGAGACGTTTGCGAACATGATTTCGATGGCGACGGTGTG
CCAGACTTCGAGGATGCCTGTTACGCAAATGCAAAGATTCAAAAAACAGATTTTAGCGTG
TTCGACCGAGTCAAATTGGACCCTAGCGGCACTGCACAAATCGATCCAAATTGGGTGATA
AGACACAAAGGAAAAGAAATCATTCAGACAGTAAACTGCGATCCTGGTTTAGCTATTAGT
CGAGACACTTTCGAAGGCGTTGATTTTGACGGAACCTTTTTCGTCAATACTGGCAATGAC
GACGATTACGCCGGTTTCGTTTTCGGTTATCAATCGTCAAGCCGCTTTTACGTTCTCATG
TGGAAGCAAGTCTCACAGAGTTATTGGAAATCTTACCCAAGTCATGCTATGGGTATGGCT
GGTCTGCAACTAAAGGTTGTGGAATCAAAAACAGGACCGGGTGAAGAGCTCCGAAATGCG
CTGTGGCATACTGGCGATACAGCAGGCCAGGTGCGAACATTATGGCAAGATCCAACATCT
CAAGGATGGAATAATCACAACGCGTACAGGTGGAGACTCAATCATAGACCGAGTACTGGT
GAAATAAGGGTTGTCATGCACAAGGGAAAAGATCTTTTAGTTGATTCGGGTCGCATCGTC
GATAAAACATACGCCGGTGGACGCATGGGAATGTTCATCTTCTCCCAAGAAATGGTATTT
TACTCCGACATGGAATACAAATGCAATGATGCTCCAATTGAATACTAGTGACAATTGCTT
GGGAATAGTACCCATTGTGTACGCGCGCCTACAAGATATAGCGCCTTAATTTTACTCCAT
AGCTCGGACAGAAGCGCCCCATCAAGAACCATAGGCCGAATACTACGCGCTGGCAGGCTA
GCTCATTTCTATTCCGGCATAGGATGTTGTGTTCTCATCACCCATCTATATTTGAAGAAA
TCTTTATCCGTGGTAGCTTTTTTTTGGAAAATCTCACACTGTACAAAGTACAGGACAATT
ATAATAACTATAATCGTTACTGATGAGTTGCCATGAAAAATATAGATTTATGAATCGCCG
TAATGATAAAAATATTTCTAGTTTACTTCACTTTATTGTCGTCTTCATATTTATTCTTGA
TTCTAGCTGCTTTTTGCCACCTTTCGCTTCCAGCTTTCATTTCATTTATGACCATTAG
| PANTHER |
Thrombospondin (IPR037349) - T[2-649] 0.0 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[23-63] 6.894 - T[64-106] 7.63 - T[122-162] 9.578 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[23-63] 0.16 - T[64-121] 3.0E-4 |
| SMART |
EGF-like_dom (IPR000742) - T[26-63] 0.28 - T[67-121] 15.0 - T[125-165] 1.0 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[64-103] 4.3E-8 |
| Gene3D |
TSP_type-3_rpt (IPR028974) - T[161-255] 2.5E-19 - T[256-314] 1.3E-19 - T[315-436] 4.3E-42 |
| SUPERFAMILY |
TSP_type-3_rpt (IPR028974) - T[170-256] 2.88E-13 - T[253-315] 5.1E-13 - T[314-432] 1.7E-32 |
| ProSiteProfiles |
Thrombospondin_3_rpt (IPR017897) - T[171-207] 13.393 - T[208-243] 15.868 - T[244-266] 11.222 - T[267-302] 15.09 - T[303-325] 11.776 - T[326-363] 12.633 - T[364-399] 16.421 - T[400-435] 14.19 |
| Pfam |
Thrombospondin_3-like_rpt (IPR003367) - T[210-243] 8.6E-8 - T[268-302] 1.4E-6 - T[302-325] 0.0019 - T[327-363] 1.6E-9 - T[364-399] 4.4E-7 - T[401-434] 1.6E-11 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[436-650] 7.28E-97 |
| ProSiteProfiles |
Thrombospondin_C (IPR008859) - T[439-653] 92.418 |
| Pfam |
Thrombospondin_C (IPR008859) - T[453-650] 8.0E-92 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSP1_HUMAN | 59.722 % | 752 | 0 |
| TSP2_HUMAN | 58.86 % | 724 | 0 |
| TSP3_HUMAN | 49.481 % | 559 | 0 |