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TRANSCRIPT CARD

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  1. Clone 'ma108f13' > 
  2. Clone 'cima813141' > 
  3. Clone 'AHC0AAA74YK23' > 
  4. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S642.g06061.01.t

Possible name(s)

SRSF1; SRSF3; SRSF7

Gene model

Haaura.CG.MTP2014.S642.g06061

Location

S642 [9,191 / 11,082]

Sequences

Amino acid sequence

Length: 191

>Haaura.CG.MTP2014.S642.g06061.01.p
MARNGNLDCKIYVGNLGDQGSKGEIERVFSYYGHLKNVWVARNPAGFAFVEFLDQRDAVD
AVRALDGRTICGVRARVEMSSGATRKGGRSSGGGRFSNHNRRDYDHDRRRSYRSRSRSPR
KRVSRSRSRSKGKERRSYRSRSRSAEYSSRRRSPSPAHHSRPVSPVRDQSRSRSPEMKKG
RSRSGSRSSD*

Nucleotide sequence

Length: 573

>Haaura.CG.MTP2014.S642.g06061.01.t
ATGGCAAGGAACGGAAATTTAGACTGCAAGATTTACGTGGGAAATTTAGGTGACCAAGGT
TCCAAGGGAGAAATTGAGCGTGTTTTCAGTTACTACGGACACCTGAAAAACGTTTGGGTT
GCAAGAAATCCTGCTGGTTTTGCGTTTGTTGAGTTTTTGGATCAAAGAGATGCTGTAGAT
GCAGTACGTGCCTTGGATGGACGAACTATATGTGGAGTCAGAGCAAGAGTTGAAATGTCT
TCTGGTGCGACTCGTAAGGGTGGACGTAGTAGTGGTGGAGGTAGATTTTCTAATCACAAC
AGGAGAGATTACGACCATGATCGCAGAAGAAGCTATAGATCCAGATCACGTAGCCCACGG
AAACGTGTTTCTCGTAGCCGGAGCCGGAGCAAAGGAAAAGAGAGAAGATCATACAGGAGT
AGAAGCCGATCTGCGGAATATAGCAGCAGAAGAAGAAGTCCAAGCCCTGCTCATCATAGT
CGCCCAGTTTCTCCAGTTAGAGATCAGTCTAGATCTCGTAGTCCAGAAATGAAAAAGGGA
AGGAGCAGATCGGGCAGCAGATCTTCAGATTGA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[4-83] 1.4E-20
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[9-111] 2.01E-22
ProSiteProfiles
RRM_dom (IPR000504) - T[9-82] 15.494
SMART
RRM_dom (IPR000504) - T[10-78] 2.1E-17
Pfam
RRM_dom (IPR000504) - T[11-72] 5.1E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF3_HUMAN 70.886 % 127 1.91E-37
SRSF7_HUMAN 65.823 % 116 1.24E-32