Aniseed - Transcript Card

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Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6489.g11102.01.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S6489.g11102

Location

S6489 [1,127 / 1,844]

Sequences

Amino acid sequence

Length: 239

>Haaura.CG.MTP2014.S6489.g11102.01.p
DINDTESRLDVLINNAGVMMCPQSETKDGFETQFGTNHLGHFLLTNLLLDSLKKSAPSRI
VTVSSLVHYRWALTSMQWDDLNLRKNYDSILAYGQSKLCNVLFSRELSKKLQGTGVTSNS
LEPGVVETDLRRHVGTHEKPSFKDRLMSLYTYFTGWALSTQEKGAQTSIYLAVAPELADV
SGKYYSNCKQRGESYDAMNDEFAERLWKISEEFTGLNPKSEGEDVKQTSQESEEQKVAE

Nucleotide sequence

Length: 717

>Haaura.CG.MTP2014.S6489.g11102.01.t
GACATCAATGATACCGAATCTCGACTTGATGTTCTTATTAATAACGCAGGGGTGATGATG
TGCCCCCAATCCGAGACCAAAGATGGGTTCGAGACGCAGTTCGGTACGAATCATCTGGGG
CATTTTCTCTTAACGAATTTGTTGTTGGATTCATTGAAGAAAAGTGCACCAAGCAGGATT
GTGACTGTGTCTTCTCTTGTTCACTATAGATGGGCCTTAACATCAATGCAATGGGACGAT
TTGAATTTGAGAAAGAACTATGATTCAATCCTAGCTTATGGCCAAAGCAAGCTATGCAAT
GTGCTTTTCTCTAGAGAGCTAAGCAAGAAACTGCAAGGCACTGGTGTTACATCAAATAGT
TTGGAACCTGGCGTGGTTGAGACAGATTTACGGAGACACGTTGGAACACATGAGAAGCCT
TCGTTCAAGGACCGGTTGATGTCGTTATACACTTATTTTACAGGATGGGCGCTTAGCACC
CAAGAAAAGGGGGCTCAAACCTCTATTTACTTGGCAGTTGCCCCAGAGCTTGCAGATGTC
AGCGGAAAGTATTACTCCAACTGCAAACAGAGGGGAGAGTCGTACGATGCGATGAATGAT
GAGTTTGCAGAGAGATTGTGGAAAATCAGTGAAGAATTTACTGGTCTTAACCCGAAAAGT
GAGGGAGAAGATGTGAAGCAAACTTCTCAGGAGAGTGAGGAGCAGAAAGTAGCAGAG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[4-190] 6.13E-32
PRINTS	SDR_fam (IPR002347) - T[7-18] 5.0E-6 - T[7-18] 2.3E-11 - T[52-68] 2.3E-11 - T[58-66] 5.0E-6 - T[93-112] 5.0E-6 - T[93-112] 2.3E-11 - T[114-131] 2.3E-11
Pfam	SDR_fam (IPR002347) - T[7-67] 3.2E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH13_HUMAN	52.036 %	194	6.36E-61
RDH14_HUMAN	51.415 %	190	1.56E-59
RDH12_HUMAN	50.237 %	185	1.25E-57