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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.73.v4.A...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S68...' > 
  4. Molecular Tool 'citb15e8-MO (Hamada's MO)' > 
  5. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6489.g11102.05.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S6489.g11102

Location

S6489 [1,181 / 2,003]

Sequences

Amino acid sequence

Length: 274

>Haaura.CG.MTP2014.S6489.g11102.05.p
DLAKREARVIIACRNMEKGEEAKKKIVEESKSENVVLKKLDLSSFESVREFAADINDTES
RLDVLINNAGVMMCPQSETKDGFETQFGTNHLGHFLLTNLLLDSLKKSAPSRIVTVSSLV
HYRWALTSMQWDDLNLRKNYDSILAYGQSKLCNVLFSRELSKKLQGTGVTSNSLEPGVVE
TDLRRHVGTHEKPSFKDRLMSLYTYFTGWALSTQEKGAQTSIYLAVAPELADVSGKYYSN
CKQRGESYDAMNDEFAERLWKISEEFTGLNPKSE

Nucleotide sequence

Length: 822

>Haaura.CG.MTP2014.S6489.g11102.05.t
GATTTGGCCAAGAGAGAAGCAAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTT
GATCTCTCGTCGTTTGAATCTGTTCGAGAATTCGCCGCTGACATCAATGATACCGAATCT
CGACTTGATGTTCTTATTAATAACGCAGGGGTGATGATGTGCCCCCAATCCGAGACCAAA
GATGGGTTCGAGACGCAGTTCGGTACGAATCATCTGGGGCATTTTCTCTTAACGAATTTG
TTGTTGGATTCATTGAAGAAAAGTGCACCAAGCAGGATTGTGACTGTGTCTTCTCTTGTT
CACTATAGATGGGCCTTAACATCAATGCAATGGGACGATTTGAATTTGAGAAAGAACTAT
GATTCAATCCTAGCTTATGGCCAAAGCAAGCTATGCAATGTGCTTTTCTCTAGAGAGCTA
AGCAAGAAACTGCAAGGCACTGGTGTTACATCAAATAGTTTGGAACCTGGCGTGGTTGAG
ACAGATTTACGGAGACACGTTGGAACACATGAGAAGCCTTCGTTCAAGGACCGGTTGATG
TCGTTATACACTTATTTTACAGGATGGGCGCTTAGCACCCAAGAAAAGGGGGCTCAAACC
TCTATTTACTTGGCAGTTGCCCCAGAGCTTGCAGATGTCAGCGGAAAGTATTACTCCAAC
TGCAAACAGAGGGGAGAGTCGTACGATGCGATGAATGATGAGTTTGCAGAGAGATTGTGG
AAAATCAGTGAAGAATTTACTGGTCTTAACCCGAAAAGTGAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[2-243] 1.89E-45
Pfam
SDR_fam (IPR002347) - T[2-120] 1.6E-18
PRINTS
SDR_fam (IPR002347) - T[60-71] 3.5E-11 - T[60-71] 7.0E-6 - T[105-121] 3.5E-11 - T[111-119] 7.0E-6 - T[146-165] 3.5E-11 - T[146-165] 7.0E-6 - T[167-184] 3.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 46.468 % 223 4.84E-72
RDH13_HUMAN 51.273 % 244 3.97E-80
RDH12_HUMAN 49.071 % 231 4.01E-75