- Transcript 'Moocci.CG.ELv1_2.S59...' >
- Molecular Tool 'Tox MO (Satou lab)' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S64.g01507.02.t
Possible name(s)
CHRD; CHRDL1; CHRDL2
Gene model
Location
S64 [127,019 / 132,004]
Amino acid sequence
Length: 951
>Haaura.CG.MTP2014.S64.g01507.02.p
MGSRRLSKLQFLGILCTCLLSLTEGFFPLKSENLKMIKPAKGCMFGNRYHTAGSSWHPNL
GFPFGVMYCIRCNCVKYAVAGRSKKELTKVVCHDVRKDCPPVSCKGAKVQRGECCKTCPE
ESLAEKSFPSSSKWDQLDFDSKFLLEKTLNDDEDRVEKSASSKQFVALLTNEEREQKSYL
ARATLTLQRGNLHFSIHHPNSSKPELVELVDESNSILYSHQIRSFKLRESLACGVWRNLP
KNIIHALNEGHLILRLTVRNSSDNPSSDKALYASGIIITHRALYSETFSSQLYPDQDGGS
GAIVMMTFGRNFKNINFAVIHRYVWPQDNRRRRNDQSTHISLELKNENGDTLRRTEKKVS
QLQNEFADVWNTNSDMLRSLGKGSLHLVMEAQQGRRGDRQRFVGNITVKATCNLLQAVLS
GSDCKPTTNTGSVGSAVFNVNSDNTISYQVFLSGMSSEVTLLQMTAAYTKKRSRVILDLT
PQFHNGVSEGLLKEVSAKELHSLLSEKVAVMAQTKANKQCEINGNVASLLYSGHLTRYHG
IPIPLSGSLVVPPVNTGAGGHAWLQLDENCHLHYEIVVAGLSKDSDASVSAHLHGLAEIA
GYEPTHKKLLKGFYGTEARGILKEINKELYEIMNNGSAFVQVATKRNPNGEIRGRVHIPN
TCMKVDDNSEKKFDDYDKNATPVSASMEHDAIVHDSAGPQEIQSLQDSLQEEAESCYFEG
IWHNHDKEWSPVYDTKCTSCICEHGNVLCNPVNCPSLSCPYPVVIESECCPVCQDEFSTV
LGDLEKKEESYSIGSIIPLENQKTLEYEETEFVNSGGCFENGENIPRPYGSSWHPVIHPF
GKITCVVCTCHYNGEIKCEKVQCPATPCQNPVRENPGDCCKVCPDIRFENTDRITTDERW
MQDGASQAMCTFGKRLHVVGASWNPYVHNFGKLKRVPEMRSELSKHTKRLR
Nucleotide sequence
Length: 2,853
>Haaura.CG.MTP2014.S64.g01507.02.t
ATGGGATCTCGCCGATTATCAAAGTTGCAATTTCTCGGAATTTTGTGCACATGCCTTCTG
AGCTTGACTGAAGGGTTCTTTCCGTTGAAATCAGAAAATTTGAAGATGATAAAACCAGCT
AAAGGATGTATGTTTGGAAATCGTTATCATACAGCAGGGTCATCGTGGCATCCTAATCTA
GGTTTCCCGTTTGGAGTCATGTATTGCATCAGATGCAATTGCGTGAAGTATGCGGTTGCA
GGCAGAAGCAAAAAAGAACTTACTAAAGTCGTCTGTCACGATGTGCGTAAGGACTGTCCT
CCTGTTTCGTGCAAAGGGGCAAAAGTACAAAGAGGAGAATGCTGCAAAACTTGTCCTGAA
GAATCGCTGGCTGAAAAAAGTTTTCCATCGTCATCAAAATGGGACCAATTAGATTTTGAC
TCTAAATTCCTCCTCGAAAAAACTCTAAATGACGACGAAGACCGGGTTGAAAAGAGCGCT
TCCAGCAAACAATTTGTCGCTCTGCTGACAAATGAGGAGAGAGAACAGAAGTCGTATTTG
GCTAGAGCGACCCTTACACTTCAGCGGGGCAACTTGCATTTCTCCATACATCATCCAAAT
TCATCCAAACCTGAGCTGGTCGAACTTGTCGATGAAAGCAACTCAATCTTATACAGCCAC
CAGATCAGAAGTTTTAAACTAAGAGAATCTCTTGCATGCGGGGTTTGGCGAAATCTTCCA
AAAAATATCATCCACGCTTTGAACGAAGGACATCTCATCTTGAGATTAACCGTACGAAAC
AGCAGTGATAATCCGTCGTCTGATAAAGCGTTATACGCAAGCGGCATTATAATCACTCAT
AGAGCTCTATATTCAGAGACATTCAGTTCCCAGTTGTATCCGGATCAAGACGGTGGAAGC
GGAGCTATAGTCATGATGACGTTTGGAAGGAATTTCAAAAATATCAATTTTGCGGTGATT
CATAGATACGTATGGCCGCAAGACAATCGTAGACGAAGAAATGACCAGTCTACTCACATA
TCCTTGGAATTGAAAAACGAAAACGGAGATACTTTGCGAAGAACTGAGAAGAAAGTATCG
CAACTGCAAAATGAATTTGCCGATGTTTGGAATACCAACTCCGATATGTTGAGGTCACTA
GGCAAAGGCTCGTTGCATCTAGTTATGGAGGCGCAGCAGGGTAGACGAGGGGATAGACAG
AGATTCGTGGGAAATATCACAGTGAAAGCCACCTGTAATTTGTTACAAGCAGTTTTATCC
GGAAGCGATTGCAAACCAACAACTAATACCGGTTCTGTGGGTTCTGCCGTATTCAATGTT
AATTCTGACAACACGATATCTTACCAGGTTTTTTTATCGGGCATGTCTAGTGAAGTGACA
TTACTGCAAATGACTGCAGCTTATACCAAGAAGAGATCAAGAGTTATCCTGGACTTGACG
CCTCAATTTCATAATGGTGTCTCTGAAGGTTTGCTCAAAGAAGTTTCCGCGAAGGAGCTG
CATTCTTTGCTCAGTGAAAAAGTCGCAGTTATGGCGCAGACTAAAGCTAACAAACAATGC
GAAATAAACGGAAACGTAGCATCACTGCTTTACAGCGGACATTTAACAAGATATCACGGT
ATACCGATTCCCTTGTCTGGTTCTCTCGTCGTTCCTCCTGTTAACACTGGCGCTGGTGGA
CATGCATGGCTTCAGCTGGATGAGAATTGTCATTTGCATTATGAGATTGTTGTTGCTGGT
CTCAGCAAAGATTCGGATGCATCAGTATCAGCTCACTTACACGGTTTGGCAGAAATCGCT
GGCTACGAGCCGACTCATAAGAAGCTGCTCAAAGGATTTTACGGAACTGAGGCTCGCGGA
ATATTAAAAGAAATCAATAAAGAACTTTACGAAATCATGAACAATGGTTCGGCATTCGTC
CAGGTTGCAACTAAGAGAAATCCTAACGGTGAAATACGCGGTCGAGTCCATATACCCAAC
ACTTGCATGAAAGTGGATGATAACAGTGAAAAGAAATTCGACGACTATGATAAAAACGCG
ACTCCAGTGTCTGCCTCCATGGAACACGATGCAATCGTACATGATTCGGCCGGTCCCCAG
GAAATACAGTCGTTACAAGACAGCTTGCAAGAAGAAGCAGAATCCTGCTACTTTGAAGGC
ATATGGCATAATCACGATAAAGAATGGTCTCCCGTATACGACACGAAATGTACCTCGTGT
ATTTGTGAACACGGAAATGTTCTCTGCAACCCAGTCAACTGTCCATCTCTCTCGTGCCCA
TACCCAGTAGTAATTGAATCGGAATGTTGTCCGGTGTGCCAGGATGAATTTTCTACCGTT
TTGGGAGACTTAGAAAAGAAAGAGGAGTCCTATTCTATAGGTTCAATTATTCCATTAGAA
AATCAAAAAACTTTAGAATATGAAGAAACAGAATTTGTAAATTCAGGAGGTTGTTTTGAA
AACGGAGAAAATATTCCTCGTCCTTACGGTTCATCCTGGCATCCAGTCATCCACCCTTTT
GGTAAAATCACTTGCGTCGTTTGTACCTGCCACTACAACGGCGAAATAAAATGCGAAAAG
GTTCAATGCCCAGCAACACCTTGTCAAAACCCCGTTCGTGAAAACCCCGGAGATTGCTGC
AAAGTGTGTCCTGATATTCGCTTTGAGAACACGGATCGAATAACCACGGACGAAAGATGG
ATGCAAGATGGCGCCAGTCAGGCAATGTGTACTTTCGGAAAGAGACTTCATGTTGTAGGC
GCAAGTTGGAATCCGTACGTGCATAATTTCGGAAAGCTCAAGCGTGTTCCGGAAATGCGT
TCGGAATTGTCCAAACATACCAAACGACTGCGA
| PIRSF |
Chordin (IPR016353) - T[1-948] 0.0 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[41-119] 8.997 - T[714-774] 11.409 - T[816-884] 9.962 |
| SMART |
VWF_dom (IPR001007) - T[43-118] 0.18 - T[716-773] 1.6E-8 - T[818-883] 0.0021 |
| Pfam |
VWF_dom (IPR001007) - T[43-118] 3.5E-8 - T[716-773] 8.8E-8 - T[828-883] 1.3E-7 |
| ProSiteProfiles |
CHRD (IPR010895) - T[161-282] 20.768 - T[284-408] 15.685 - T[411-531] 20.478 - T[537-661] 21.794 |
| SMART |
CHRD (IPR010895) - T[413-528] 2.7E-28 - T[539-658] 1.0E-28 |
| Pfam |
CHRD (IPR010895) - T[415-526] 2.4E-8 - T[543-656] 1.8E-19 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[737-773] . - T[845-883] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHRD_HUMAN | 32.616 % | 459 | 1.44E-146 |