- Transcript 'KH2012:KH.C11.541.v1...' >
- Transcript 'KH2012:KH.L18.125.v2...' >
- Molecular Tool 'Hl-GATAa-WRPW' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S656.g06128.01.t
Possible name(s)
RASSF1; RASSF3; RASSF5
Gene model
Location
S656 [20,043 / 29,296]
Amino acid sequence
Length: 555
>Haaura.CG.MTP2014.S656.g06128.01.p
MPFTKPVETPSTGKLTPNERRNLRKHVDILANKSAVKKQTDKLVGRSAPVSRQSDVAKQP
VLTPYGATKNGGLKPTPNSRPSSAYSKPPSPWQRDKQVDKPPTPQNNKLRPSFFLFNIFY
IFLYRPTSGFHQQQRSNSPAGNASAVATRNRSRTTIGDSTNAPNTKVQSNGSRARSTSSP
KPVQAVKPNTKPEQRSNEKLAVSYNSGSSSVAMPQIKETKATLKKNEPVEKVVKKDDKLL
AVVPKRSRAHVMPQSSTSKPRKKGHDFQPHELTDWVNWCDACGSIILSLFGKCVRCKKCK
MVCHVKCAETVSLTCEADAARGIDPSWYKTIVEETKDEATLKEYNTITRVLPQEEIKEKI
EAFNKTVKSTQQMTLQEDGETFRGFIRVTMNLTRPVSVNSDKPTSKLQRNDSFYVNKGAV
KALYLSSNTTSEEVVSALLNKYGIRDNPLKFALYEKQFREEGHIILRKMMTRERPLFLRL
LWGDGNTQQHAFILQENESREIQWESFSVPELNTFLKILEKEQNDHIKCIKTKFDSRRQD
MVNAMKHRKKMGLI*
Nucleotide sequence
Length: 1,665
>Haaura.CG.MTP2014.S656.g06128.01.t
ATGCCGTTCACCAAACCGGTTGAAACACCGTCTACAGGAAAATTGACGCCGAATGAACGG
AGAAATCTACGAAAACATGTTGATATACTTGCGAATAAATCTGCAGTTAAGAAACAAACT
GATAAATTAGTAGGTCGGTCTGCTCCTGTGTCTCGTCAAAGTGATGTGGCAAAACAGCCA
GTACTAACCCCATATGGAGCTACAAAGAATGGAGGATTAAAACCAACTCCGAACTCACGA
CCTTCATCAGCGTACAGTAAACCACCATCACCCTGGCAACGAGATAAACAAGTTGATAAA
CCTCCGACCCCTCAGAATAATAAATTAAGACCCAGCTTTTTCTTGTTTAACATATTCTAC
ATTTTCCTCTACAGACCAACTAGCGGCTTTCATCAACAACAGAGATCAAATTCACCAGCT
GGAAATGCATCAGCGGTTGCCACAAGAAATAGATCAAGAACTACAATTGGAGATAGCACT
AATGCTCCTAATACGAAAGTTCAATCGAATGGATCCCGCGCACGATCAACATCATCACCT
AAACCCGTTCAAGCAGTGAAACCAAACACCAAACCAGAGCAGAGGTCGAACGAGAAACTC
GCTGTGTCTTATAATTCCGGAAGTTCGTCGGTTGCGATGCCGCAAATCAAAGAAACGAAA
GCAACTTTGAAGAAGAACGAACCGGTTGAAAAAGTTGTGAAGAAAGATGATAAATTATTG
GCTGTTGTACCGAAGCGTTCTCGAGCACATGTGATGCCTCAGTCAAGTACTTCAAAGCCT
AGAAAAAAAGGTCACGACTTTCAACCCCATGAACTCACTGATTGGGTGAATTGGTGCGAT
GCGTGCGGAAGCATCATTCTATCGTTATTTGGAAAATGTGTACGATGTAAAAAATGTAAA
ATGGTTTGCCATGTTAAATGTGCCGAAACTGTATCGCTGACGTGCGAAGCCGACGCTGCC
CGTGGAATCGATCCATCTTGGTATAAAACAATCGTTGAGGAAACGAAAGATGAGGCTACA
TTGAAGGAATACAACACGATCACACGAGTTTTGCCGCAAGAGGAAATAAAAGAAAAAATT
GAGGCTTTCAATAAAACTGTGAAAAGTACACAGCAAATGACACTGCAAGAGGATGGGGAA
ACATTTCGTGGTTTCATCCGTGTCACAATGAATCTCACCCGTCCAGTCAGTGTTAACAGC
GACAAGCCGACCAGTAAACTTCAGAGAAACGATTCATTTTATGTTAATAAGGGTGCAGTT
AAAGCTCTATATTTAAGTTCCAATACAACCTCTGAAGAAGTCGTCTCTGCTTTGTTAAAT
AAATATGGAATTCGAGATAATCCACTGAAGTTTGCTCTCTATGAAAAGCAATTTCGCGAA
GAAGGTCACATCATTCTTCGTAAAATGATGACCCGAGAACGACCTCTGTTTCTACGGTTA
CTGTGGGGCGACGGCAACACACAGCAGCACGCATTTATATTGCAGGAGAATGAGTCAAGG
GAAATACAGTGGGAATCGTTCTCAGTCCCTGAACTCAACACATTCCTTAAAATTCTCGAG
AAAGAACAAAACGATCACATCAAATGCATCAAGACGAAATTCGACAGCAGAAGACAGGAT
ATGGTTAATGCTATGAAGCACAGGAAAAAAATGGGTTTGATTTAA
| PANTHER |
C-RASSF (IPR033614) - T[174-179] 1.3E-68 - T[261-547] 1.3E-68 |
| ProSiteProfiles |
PE/DAG-bd (IPR002219) - T[264-315] 11.793 |
| SMART |
PE/DAG-bd (IPR002219) - T[265-315] 1.3E-7 |
| Pfam |
PE/DAG-bd (IPR002219) - T[265-317] 2.1E-7 |
| CDD |
PE/DAG-bd (IPR002219) - T[265-315] 2.94772E-10 |
| ProSitePatterns |
PE/DAG-bd (IPR002219) - T[265-315] . |
| SMART |
RA_dom (IPR000159) - T[403-499] 1.2E-5 |
| ProSiteProfiles |
RA_dom (IPR000159) - T[403-499] 13.182 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[419-497] 2.51E-8 |
| Pfam |
RA_dom (IPR000159) - T[419-498] 1.1E-11 |
| ProSiteProfiles |
SARAH_dom (IPR011524) - T[501-548] 13.131 |
| Pfam |
SARAH_dom (IPR011524) - T[507-545] 9.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RASF5_HUMAN | 36 % | 194 | 2.18E-56 |
| RASF1_HUMAN | 37.667 % | 188 | 9.12E-55 |
| RASF3_HUMAN | 38.5 % | 124 | 1.85E-32 |