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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S686.g06245.01.t

Possible name(s)

RDH13

Gene model

Haaura.CG.MTP2014.S686.g06245

Location

S686 [34,568 / 36,513]

Sequences

Amino acid sequence

Length: 303

>Haaura.CG.MTP2014.S686.g06245.01.p
GATVVMGCRHMGKCEEAAREIRRKTENAGVVCRFLDLASLDTVEEFSENLRKEIPHIDVL
INNAGVMKPRPPRTTPRTSDNFERQFGVNYLGHFLLTNLLLDKLSKSRSARVINLTSDAY
AKGQIDLNDLDKSEMEDDDFKLTELYYQSKLAVVLFTDYLSRYFSTVTEFSHVTANCLNP
GVTKTRIGRHAEAPLYAIGMQLYKPIQTILMKTPAQGAQTSIYLAVASDLKDKSGGYFDD
CNELNKTCNVCDSKLADDLWDMSEQWTDVKNRLDRVRDGEMKNTSNSNNEAGDSLRDTLR
RK*

Nucleotide sequence

Length: 909

>Haaura.CG.MTP2014.S686.g06245.01.t
GGAGCGACAGTTGTAATGGGATGTCGTCATATGGGCAAATGTGAAGAGGCTGCGAGAGAG
ATCCGGAGAAAAACAGAGAACGCCGGTGTGGTTTGCAGATTTCTTGATCTAGCTTCGCTC
GACACAGTTGAGGAGTTCTCTGAAAATTTAAGGAAAGAAATCCCACATATCGATGTTCTT
ATCAATAATGCCGGAGTAATGAAGCCCAGACCACCGCGAACAACACCTCGGACTTCCGAT
AACTTTGAGAGACAATTTGGAGTAAACTACTTAGGTCATTTTCTACTTACGAATTTACTG
TTGGATAAACTCAGCAAATCACGTTCAGCAAGAGTAATCAATCTAACCTCGGATGCTTAC
GCTAAAGGACAGATTGATCTGAATGACTTGGATAAGTCAGAAATGGAGGATGATGATTTT
AAACTCACAGAACTTTATTACCAGAGCAAATTGGCTGTTGTCTTGTTCACTGACTACTTA
TCAAGATACTTCTCTACTGTGACGGAATTTTCTCATGTAACCGCCAACTGCCTCAATCCT
GGGGTTACGAAAACGCGAATAGGAAGACATGCCGAAGCTCCTCTTTATGCTATCGGCATG
CAGCTATATAAGCCTATTCAAACAATTTTGATGAAAACTCCTGCACAAGGGGCCCAAACA
AGTATATATTTAGCAGTGGCCTCAGATTTGAAAGATAAAAGCGGGGGTTACTTTGACGAC
TGCAACGAACTGAACAAAACATGCAATGTATGCGATTCCAAACTGGCGGATGACCTCTGG
GATATGAGTGAACAATGGACCGATGTTAAAAACAGACTAGATCGCGTGAGAGATGGTGAA
ATGAAGAACACCTCAAATAGTAATAATGAAGCGGGAGATTCTCTCAGAGACACTTTGCGT
AGAAAATAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[1-232] 3.03E-38
Pfam
SDR_fam (IPR002347) - T[1-122] 1.4E-17
PRINTS
SDR_fam (IPR002347) - T[55-66] 2.2E-8 - T[55-66] 5.4E-6 - T[104-120] 2.2E-8 - T[110-118] 5.4E-6 - T[146-165] 2.2E-8 - T[146-165] 5.4E-6 - T[171-188] 2.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 46.008 % 189 2.85E-58
RDH14_HUMAN 40.86 % 181 3.42E-55
RDH12_HUMAN 38.783 % 147 3.48E-42