- Clone 'cicl089n20' >
- Transcript 'KH2012:KH.S811.1.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S6939.g11163.01.t
Possible name(s)
CSMD3; SELE; SELP
Gene model
Location
S6939 [2 / 2,070]
Amino acid sequence
Length: 438
>Haaura.CG.MTP2014.S6939.g11163.01.p
ILYFSDFRTQDLHGTPLNAIPCSRRILFADAAVERTDVTTTLSNAGIRLPSVIHNLTRRN
LAPFRALEVKLSAVLAAFSATKDTEWSEHLQLSAVTDKLAWSNPTPACQPITCPPPHVTP
ANGEVVCSDGNNLYSQCRFSCNPGFELNGVDISLCQAGNIGSGYGRWSHPAPTCSRAACP
AKPSAPKHGGIVCTKGTSLGSVCEFVCNPHYRRVGPLKSKCVQMEGGILDWDRPTPTCQP
IKCENQGKLSHGQMNCSKNNFATSTCKFECLDEDYSLYPPQAVENSCQNNTKWNIPKPCC
ARPCPPFALMDLVIVLDSSSSIGGENWITMLDFLKLFLSQYSVASDATNFGIFRYNGEVD
TDTQILLKDYPDSLESVIDAVGKIPYDGSGKNISPKLRFLYISAGTNTGNALEHALKVMF
ARENGNRPKIMDYVLVIT
Nucleotide sequence
Length: 1,314
>Haaura.CG.MTP2014.S6939.g11163.01.t
ATTCTATATTTCTCTGATTTTAGAACCCAAGACCTGCATGGAACCCCACTCAATGCAATC
CCTTGTTCCCGACGAATTCTGTTTGCAGATGCTGCTGTGGAACGGACAGATGTAACTACA
ACTCTCTCAAATGCTGGGATACGACTGCCGAGTGTGATCCACAACCTTACGCGCCGAAAT
TTGGCTCCGTTTCGTGCTCTAGAGGTAAAACTGTCGGCAGTACTTGCAGCTTTCAGTGCA
ACCAAGGATACGGAATGGTCGGAACATCTTCAACTGTCTGCAGTAACTGACAAGCTTGCT
TGGAGTAATCCTACACCAGCATGTCAACCAATCACCTGTCCTCCTCCTCATGTGACTCCT
GCAAACGGTGAAGTCGTCTGCTCAGATGGAAATAATCTATACAGTCAGTGCAGATTTTCC
TGCAATCCTGGCTTCGAATTAAATGGAGTTGACATATCTCTTTGCCAAGCTGGAAACATT
GGTAGCGGTTATGGAAGATGGTCTCACCCTGCTCCAACTTGCAGTCGTGCTGCTTGTCCA
GCAAAGCCAAGCGCCCCGAAACATGGTGGAATTGTGTGTACAAAAGGAACTTCTCTGGGT
TCTGTGTGTGAATTTGTGTGTAATCCACATTACAGGCGTGTCGGACCCCTCAAGTCGAAG
TGCGTTCAGATGGAGGGTGGAATACTGGACTGGGATAGACCGACTCCAACCTGTCAACCG
ATCAAGTGCGAAAACCAAGGAAAGCTTTCCCATGGTCAAATGAACTGCTCAAAAAACAAT
TTCGCCACATCAACATGCAAATTCGAATGCTTAGATGAAGATTATAGCCTCTACCCACCC
CAAGCTGTTGAAAATTCCTGTCAAAATAATACCAAATGGAATATTCCAAAACCATGCTGT
GCACGACCATGTCCTCCATTTGCACTGATGGACTTAGTCATCGTCCTTGACTCCTCTTCA
TCAATTGGTGGTGAAAACTGGATTACAATGTTAGATTTCTTGAAGTTATTTTTGAGTCAG
TACAGTGTTGCATCAGACGCAACTAACTTCGGAATCTTCCGCTACAATGGAGAAGTAGAT
ACAGATACCCAGATTCTTCTGAAAGATTACCCGGATTCCCTGGAATCTGTAATTGATGCT
GTTGGCAAGATCCCATACGATGGGTCAGGTAAGAACATTTCTCCAAAATTAAGATTTTTA
TATATCTCTGCAGGAACGAACACCGGTAATGCTCTCGAACACGCTCTGAAGGTTATGTTC
GCTCGGGAAAACGGAAATCGACCCAAAATTATGGATTATGTTTTAGTAATCACT
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[111-176] 9.691 - T[177-240] 8.033 - T[241-302] 7.205 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[111-183] 1.66E-12 - T[182-252] 7.57E-12 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[113-174] 3.1E-11 - T[179-238] 2.4E-7 - T[243-300] 3.9 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[113-174] 4.89358E-12 - T[179-239] 1.28034E-8 - T[243-300] 1.40072E-4 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[113-174] 7.6E-7 - T[182-238] 4.0E-7 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[295-438] 7.7E-26 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[308-438] 5.4E-22 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[311-438] 18.9 |
| Pfam |
VWF_A (IPR002035) - T[311-438] 2.2E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LYAM3_HUMAN | 32.536 % | 88.6 | 9.59E-19 |