- Transcript 'Harore.CG.MTP2014.S2...' >
- Clone 'mae39h22' >
- Transcript 'Moocul.CG.ELv1_2.S87...' >
- Transcript 'Mooccu.CG.ELv1_2.S66...' >
- Transcript 'Haaura.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S718.g06392.02.t
Possible name(s)
H2AFJ; H2AFX; HIST2H2AB
Gene model
Location
S718 [37,473 / 37,842]
Amino acid sequence
Length: 123
>Haaura.CG.MTP2014.S718.g06392.02.p
MSGRGKGSKVKAKAKSRSNRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVLEYLSA
EVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTLAQGGVLPNIQAVLLPKKT
GKT
Nucleotide sequence
Length: 369
>Haaura.CG.MTP2014.S718.g06392.02.t
ATGTCTGGACGTGGCAAAGGAAGCAAAGTAAAAGCAAAGGCAAAGTCTCGTTCTAATCGG
GCCGGTCTTCAGTTTCCAGTCGGTCGAATACACAGGCTTCTGCGTAAAGGCAACTACGCT
CAGCGTGTAGGAGCCGGTGCTCCCGTTTACCTTGCTGCAGTATTGGAATACCTGAGCGCA
GAAGTTTTGGAATTGGCGGGGAACGCTGCCCGAGACAACAAGAAGAGCAGAATCATTCCG
CGTCACCTTCAACTTGCTATTAGAAATGACGAAGAACTGAATAAGTTGCTCGGCGGTGTA
ACTTTGGCTCAGGGTGGTGTGCTGCCGAACATTCAAGCTGTTTTGCTGCCCAAGAAAACT
GGAAAGACC
| Gene3D |
Histone-fold (IPR009072) - T[2-123] 4.1E-65 |
| SMART |
Histone_H2A (IPR002119) - T[3-122] 3.3E-80 |
| CDD |
Histone_H2A (IPR002119) - T[7-119] 3.81499E-69 |
| Pfam |
Histone_H2A/H2B/H3 (IPR007125) - T[11-88] 2.3E-16 |
| PRINTS |
Histone_H2A (IPR002119) - T[13-35] 4.3E-55 - T[42-57] 4.3E-55 - T[57-70] 4.3E-55 - T[71-85] 4.3E-55 - T[99-117] 4.3E-55 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[15-119] 1.39E-45 |
| ProSitePatterns |
Histone_H2A_CS (IPR032458) - T[21-27] . |
| Pfam |
Histone_H2A_C (IPR032454) - T[91-122] 2.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H2AJ_HUMAN | 90.909 % | 219 | 1.5E-75 |
| H2A2B_HUMAN | 90.083 % | 218 | 3.72E-75 |
| H2AX_HUMAN | 88.71 % | 220 | 1.24E-75 |