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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S7836.g11263.02.t

Possible name(s)

CD209; CLEC4F; CLEC4M

Location

S7836 [393 / 1,032]

Sequences

Amino acid sequence

Length: 213

>Haaura.CG.MTP2014.S7836.g11263.02.p
MSLDGASLTISQGSLQTAGNCNTATGRPGKRGPLGRRGPKGSEGNPGSRGSVPTDVLESQ
NVKIKNLEDELKEIKILLGIYATIYTTKWTKGSNGHYYYVSEAKMNWHQAKTFCEEKGAM
LATVGPRDRSMFDFMWSLAPTSQNMWIGLNDVDVEGSWVWNDGVDSTSCNTAWLSGEPNN
GGSGVDCAMINQQYGGFHDGDCATSYHKALCEI

Nucleotide sequence

Length: 639

>Haaura.CG.MTP2014.S7836.g11263.02.t
ATGTCATTAGATGGGGCATCACTTACTATAAGTCAAGGTTCGTTGCAAACAGCTGGAAAC
TGTAATACCGCCACTGGGAGGCCCGGTAAACGGGGGCCTCTGGGACGGCGTGGTCCAAAA
GGGAGCGAGGGAAATCCTGGTTCCAGGGGTTCTGTACCAACTGACGTTTTGGAATCACAA
AATGTAAAGATAAAGAATCTGGAAGATGAACTGAAGGAAATCAAAATTCTTTTGGGAATT
TATGCAACAATTTATACAACAAAGTGGACAAAAGGAAGCAATGGACATTACTACTACGTA
AGCGAAGCTAAAATGAACTGGCATCAGGCGAAAACATTCTGTGAAGAAAAGGGAGCAATG
CTTGCTACGGTTGGACCACGTGACCGAAGCATGTTCGATTTTATGTGGAGTCTAGCGCCC
ACCAGCCAAAACATGTGGATTGGGCTGAATGATGTGGATGTTGAAGGGAGTTGGGTCTGG
AATGATGGAGTAGATTCTACATCTTGCAACACGGCTTGGCTAAGTGGAGAACCAAATAAC
GGTGGATCAGGAGTAGATTGCGCGATGATAAATCAACAATACGGAGGATTTCATGATGGT
GATTGCGCAACGAGTTATCACAAAGCGCTTTGCGAAATT

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[51-213] 9.3E-31
SMART
C-type_lectin-like (IPR001304) - T[85-212] 3.3E-16
SUPERFAMILY
CTDL_fold (IPR016187) - T[87-212] 1.4E-28
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[93-202] 17.946
Pfam
C-type_lectin-like (IPR001304) - T[104-212] 1.0E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value