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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R268...' > 
  2. Clone 'man20p04' > 
  3. Transcript 'KH2012:KH.C10.358.v1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  5. Transcript 'Haaura.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S794.g06692.03.t

Possible name(s)

CLEC3A; COLEC12; MRC2

Gene model

Haaura.CG.MTP2014.S794.g06692

Location

S794 [3,538 / 4,156]

Sequences

Amino acid sequence

Length: 206

>Haaura.CG.MTP2014.S794.g06692.03.p
MSLDGASLTISQGSLQTAGNCDTATGKPGKRGPLGPRGLKGDRGEPGTRGDVPTDVLESQ
NVKIKNLEDELKKVQFFLKIYTKWTAGNNGHYYYVSEAGMYYQQAKTFCEGKGARLATVG
PRNRTMFDFLWSLAPTRGYLWIGLTDLVHERIWVWIDGVNSSYIAWDNDQPNVRLGEHCA
IIHQVHRRGFHDTDCEWSNPKALCEI

Nucleotide sequence

Length: 618

>Haaura.CG.MTP2014.S794.g06692.03.t
ATGTCATTAGATGGGGCATCGCTTACTATCAGTCAAGGTTCGTTGCAAACAGCTGGTAAT
TGCGATACCGCCACTGGGAAGCCCGGGAAACGAGGGCCTCTGGGACCCCGTGGTCTGAAA
GGGGACAGAGGGGAGCCTGGTACCAGGGGTGATGTACCAACTGACGTTTTGGAATCACAA
AATGTAAAGATAAAGAATCTTGAAGATGAGCTGAAGAAAGTTCAATTTTTTTTGAAAATT
TATACAAAATGGACGGCGGGTAACAATGGACATTACTACTACGTAAGCGAAGCTGGAATG
TACTATCAACAGGCGAAAACATTCTGTGAAGGAAAGGGAGCAAGGCTTGCTACAGTTGGG
CCACGTAACCGCACTATGTTCGACTTTTTGTGGAGTCTAGCGCCCACTCGCGGATATCTA
TGGATTGGGCTGACTGATCTAGTTCATGAAAGGATTTGGGTCTGGATTGATGGAGTAAAT
TCTTCCTACATAGCTTGGGATAATGACCAACCAAACGTTAGATTAGGAGAACATTGTGCG
ATAATACATCAAGTACACAGAAGAGGATTTCATGACACTGATTGCGAATGGAGTAATCCA
AAAGCGCTTTGCGAAATT

InterProScan

SMART
C-type_lectin-like (IPR001304) - T[80-205] 1.2E-16
Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[81-206] 1.8E-22
SUPERFAMILY
CTDL_fold (IPR016187) - T[84-205] 1.79E-27
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[88-196] 15.143
Pfam
C-type_lectin-like (IPR001304) - T[100-205] 1.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value