- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C14.53.v2....' >
- Transcript 'Haaura.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S796.g06698.02.t
Possible name(s)
TRIM54; TRIM55; TRIM63
Gene model
Location
S796 [6,785 / 10,831]
Amino acid sequence
Length: 454
>Haaura.CG.MTP2014.S796.g06698.02.p
KPLPYNFEYVSTPILHRVYELKIVTMDALRMLSKSQGGADYEHEVERLLSCPICLEVYSK
PVVILPCQHNLCRKCANDVFQNRGTPMGSGGRFRCPTCRYEVMLDRHGVYGLQRNLLVEN
IIDMYQNENKKSFRKVEVMMCEEHEEEKVNIFCVTCQKPTCSLCKVFGQHQGCTVSPVEK
VFKDHKREISEAIAMLVAGNDRLQLVISRIEQLATNVEDNSKTVQSDVCAAFDKLYSVLE
DRKQTMLSQIKAATHEKSEVLQEMLKKYGEQLENSSTLVEESLALLEEPNASQFLSISRE
TINKVTATARATEVRKPPINIQDMNAFVVDFSAHEAELSVLDFLETGDENVYADDNDSVS
ERESTTSDIAPSTSSGGGFRAKLLLPKEEEQTEVIAEAEIKRERNDDDEVDESDDTTSLT
SRSDAGSSSATGRRESNSSHAGAITNSPYSKLF*
Nucleotide sequence
Length: 1,539
>Haaura.CG.MTP2014.S796.g06698.02.t
AAGCCTTTACCTTATAACTTTGAATATGTGTCGACTCCGATTCTTCACAGAGTGTACGAG
CTAAAGATTGTCACGATGGATGCCTTGAGAATGTTGTCAAAAAGTCAAGGTGGAGCTGAC
TACGAGCACGAAGTGGAAAGATTATTGAGTTGTCCAATATGCCTGGAGGTTTACAGTAAA
CCAGTGGTCATTTTGCCATGCCAACACAATCTCTGCAGAAAGTGTGCGAACGACGTATTC
CAGAACAGGGGAACTCCTATGGGCTCGGGAGGAAGATTCAGATGTCCTACTTGCCGATAT
GAAGTGATGCTGGATAGACACGGAGTCTACGGTTTACAAAGGAATCTTTTAGTTGAAAAC
ATAATTGATATGTATCAAAACGAAAACAAGAAGTCCTTCCGCAAAGTTGAGGTTATGATG
TGCGAAGAACACGAGGAAGAAAAAGTGAATATCTTCTGCGTCACGTGTCAAAAGCCTACG
TGTTCTCTATGTAAAGTTTTCGGCCAACACCAGGGATGTACTGTTTCTCCGGTAGAGAAA
GTTTTCAAGGACCACAAGCGCGAAATAAGCGAGGCCATAGCGATGCTAGTCGCAGGAAAC
GACAGACTACAACTTGTTATATCTCGTATTGAGCAATTAGCCACAAATGTTGAGGACAAT
AGCAAAACCGTTCAAAGTGATGTATGTGCAGCATTTGACAAACTGTATTCAGTTTTAGAG
GATCGAAAGCAAACCATGCTGAGTCAGATCAAAGCTGCGACGCACGAAAAGAGTGAAGTG
CTACAGGAGATGCTGAAGAAGTACGGAGAACAATTAGAAAACTCGAGTACCCTGGTCGAA
GAATCTCTAGCATTGCTGGAGGAGCCAAATGCTTCTCAGTTTCTGTCCATAAGTCGAGAG
ACAATCAACAAAGTTACTGCAACCGCCCGAGCTACTGAGGTGAGAAAACCACCCATCAAT
ATTCAAGATATGAATGCCTTCGTAGTGGATTTTTCAGCGCATGAAGCGGAGCTTTCTGTA
CTTGACTTTCTTGAAACAGGCGATGAGAACGTATACGCGGATGACAACGATTCAGTGAGT
GAAAGAGAGTCTACAACTTCCGATATAGCACCGTCTACATCATCGGGAGGAGGTTTTCGT
GCTAAACTTCTTCTTCCTAAAGAGGAAGAACAAACTGAAGTCATCGCGGAAGCGGAAATC
AAACGCGAGAGGAATGATGACGATGAAGTTGATGAATCTGACGATACCACGTCACTAACG
TCACGAAGTGACGCAGGAAGCTCCTCAGCCACTGGACGAAGGGAATCAAATTCCTCCCAT
GCTGGCGCAATTACAAATTCTCCATACAGTAAGTTGTTTTGACTTAAAACAATAATGACT
ATCGTTGTCGCAGATCTAAAGTTGGAAAGCGACGTGAAAGCTATAGCAGAACGCTATTTG
TCGGGAAAATCATCAAGGCCGTCATCTCGGTATGGAGCTACTGGCGATGCAAATAGTCGG
AACAGAAACTACAGCGATGAGGTGAATACAAATTTACAC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[20-128] 7.9E-20 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[51-99] 12.401 |
| SMART |
Znf_RING (IPR001841) - T[51-98] 8.2E-9 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[51-96] 1.7E-10 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[67-76] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[136-178] 11.434 |
| SMART |
Znf_B-box (IPR000315) - T[136-178] 6.8E-7 |
| Pfam |
Znf_B-box (IPR000315) - T[137-175] 2.8E-7 |
| CDD |
Znf_B-box (IPR000315) - T[140-178] 2.99613E-7 |
| SMART |
Bbox_C (IPR003649) - T[185-311] 6.2E-10 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[286-344] 14.039 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI54_HUMAN | 48.368 % | 320 | 1.61E-106 |
| TRI63_HUMAN | 45.455 % | 305 | 4.61E-101 |
| TRI55_HUMAN | 47.205 % | 320 | 3.3E-104 |