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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S812.g06756.01.t

Possible name(s)

CHPF; CHSY1; CHSY3

Location

S812 [28,151 / 29,860]

Sequences

Amino acid sequence

Length: 490

>Haaura.CG.MTP2014.S812.g06756.01.p
MNSNSVYMTGSVLVRQLHVSRILTGLLLGFSMHLIYQFIITVATQDALVVRYNQNCPPCE
DPSRVRAVPCPVCGATVVTMDKDQMVVDSYKPKGMYEVTRWYYFDEEYLYDIINGKPKVK
LLGSWYEETKAVTQVGLEYINANEMLGKTWSLVRLKNGYLRRDVFRGTDYILDIAVKSME
KHPSESISCAFRVRLVHAFEKGLQVLEISHENEVNIHIVAPVSGDEKSLESFVKRYVNQA
AKQNNKNIQITLVLFNGMGLFGEKSGEMKPLVERLIEENSNSQIKYIELAGDYNFLKGIQ
RGTANAKSGEVILTLKMDMAFGQNLLETCRMIPKNQKRVYFPIAFSQYDPDIIERGMPPG
KPKNINKLDINKFTGYWSHKVHDFMCMYYDDAVPALNRVLRSVENNAQHFYDIGSEGGVC
MYDTFLSSNLDVISAVEPDLVRMYRKRTCDKNILSKNDYHQCVQLKAETVGSKPALSILY
ITEIEQKKV*

Nucleotide sequence

Length: 1,470

>Haaura.CG.MTP2014.S812.g06756.01.t
ATGAATTCCAATTCCGTTTATATGACTGGTTCGGTCTTAGTTAGGCAACTGCATGTGTCA
AGAATTTTGACAGGATTGTTGCTTGGCTTCAGCATGCATCTGATTTACCAGTTCATCATC
ACCGTGGCAACACAAGATGCCCTGGTTGTACGGTACAACCAAAACTGTCCGCCATGTGAA
GATCCTAGTAGGGTTCGCGCTGTGCCCTGTCCGGTCTGTGGAGCGACAGTAGTAACTATG
GATAAAGATCAGATGGTGGTCGACTCATACAAGCCAAAGGGAATGTACGAAGTGACAAGA
TGGTATTACTTCGATGAAGAATACTTGTATGACATCATAAATGGAAAACCCAAAGTAAAA
CTGCTGGGAAGCTGGTACGAAGAAACCAAAGCCGTGACCCAGGTCGGCCTGGAGTACATA
AACGCTAACGAAATGCTTGGAAAGACATGGAGTTTGGTCCGGCTCAAAAACGGTTATTTG
CGGAGAGATGTGTTCCGTGGGACAGACTATATCTTGGACATCGCTGTCAAGTCGATGGAA
AAGCATCCATCGGAAAGTATAAGCTGTGCATTTCGAGTTCGCTTGGTCCATGCCTTCGAA
AAGGGCTTGCAGGTTCTCGAGATATCGCATGAAAACGAAGTTAATATACATATCGTTGCG
CCAGTTTCAGGGGATGAAAAATCTTTAGAATCATTTGTGAAAAGGTATGTGAATCAAGCC
GCCAAACAAAACAACAAAAACATCCAGATAACGCTTGTACTATTCAATGGAATGGGACTA
TTTGGAGAGAAGAGTGGTGAGATGAAACCATTAGTAGAACGACTTATAGAGGAGAATTCG
AATTCGCAAATAAAATATATCGAATTAGCAGGTGACTACAATTTCTTGAAAGGGATTCAG
CGTGGAACAGCCAATGCAAAATCAGGCGAAGTAATACTGACATTAAAAATGGACATGGCG
TTTGGACAAAACCTTCTTGAAACGTGCAGGATGATACCCAAGAACCAGAAACGGGTTTAT
TTTCCCATCGCGTTCAGCCAGTATGACCCCGACATAATAGAACGTGGCATGCCGCCCGGC
AAACCAAAAAACATCAATAAATTGGACATCAACAAATTCACTGGCTATTGGTCACACAAA
GTTCACGACTTTATGTGCATGTACTATGATGACGCAGTACCTGCTTTGAACAGAGTGCTC
AGATCCGTGGAAAACAATGCTCAACATTTTTATGATATCGGCAGCGAAGGGGGCGTATGT
ATGTACGACACTTTTTTATCAAGCAATTTAGATGTTATATCGGCGGTTGAACCAGATCTT
GTGAGAATGTACCGCAAGAGGACGTGTGATAAAAATATTCTGTCTAAGAATGACTATCAT
CAATGTGTTCAGCTCAAAGCAGAAACAGTAGGATCTAAACCTGCATTAAGTATTCTCTAT
ATCACTGAAATTGAACAGAAAAAAGTTTGA

InterProScan

Pfam
Chond_GalNAc (IPR008428) - T[89-476] 2.3E-66

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 22.588 % 98.6 1.1E-21
CHSS1_HUMAN 23.009 % 93.6 3.64E-20
CGAT1_HUMAN 26.642 % 88.2 1.31E-18