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TRANSCRIPT CARD

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  1. Clone 'citb090a15' > 
  2. Clone 'AHC0AAA59YB04' > 
  3. Transcript 'KH2012:KH.C12.600.v1...' > 
  4. Region 'REG00001522' > 
  5. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S815.g06767.01.t

Possible name(s)

DRGX; PHOX2A; PHOX2B

Gene model

Haaura.CG.MTP2014.S815.g06767

Location

S815 [18,327 / 22,863]

Sequences

Amino acid sequence

Length: 503

>Haaura.CG.MTP2014.S815.g06767.01.p
MEYPYLGPSASYDNAACMVAANGENSAFGLSSSYPEFNSCAHAQVSQSAFQASGYASSMP
MRSANFGAACHTSVPHVAACSLSGLREASPYSSVPYKFFSETSHHTSFGGLHERRKQRRI
RTTFTSSQLKELERVFSETHYPDIYTREELALKIDLTEARVQVWFQNRRAKWRKMERAKQ
QQLQPNLPQGSPASSSSGDVTNLSSETACHDINQRGVSLPSSETDLKSCSETATNGASGS
AEEDQHRDLPSAMSQSTLQMTARDQATLLKVGLSATGSKKSSQIDRNHVNRNSASSSVSN
DLSLDPRSMTNDDGLSSNQSSTSCMQGNPFQSSYDQKHQSNSTSNQQSRSQQRSYNGHSD
MLQGAPQGYSSSSSVSWLLAGGGTNPSNPLHSAPFVDVLSALTRNVGSSAAAAALMTSSH
MTSGSPTSPSTSSSLNAYHNYSGLQAVPYYQDCGKNLLMAADVSGLHGVSLRNNSSNNNN
DCRSRRIMSSSPNLSTDNVIAL*

Nucleotide sequence

Length: 1,509

>Haaura.CG.MTP2014.S815.g06767.01.t
ATGGAGTATCCCTATTTGGGTCCTAGCGCATCTTACGATAATGCCGCCTGTATGGTCGCG
GCGAACGGCGAAAACAGTGCATTCGGCCTGTCGTCCTCCTACCCGGAATTTAATTCGTGT
GCTCATGCTCAGGTTTCTCAGTCGGCATTCCAAGCCTCGGGATATGCATCCAGCATGCCG
ATGCGTTCGGCAAATTTCGGAGCGGCTTGCCATACTTCGGTGCCGCACGTCGCTGCATGT
AGCCTAAGCGGACTCCGAGAAGCATCACCGTATTCTTCAGTTCCGTATAAATTCTTCTCT
GAAACTTCCCACCACACAAGCTTTGGCGGATTGCACGAAAGACGGAAGCAGAGACGAATT
CGTACAACGTTTACAAGCTCCCAACTAAAGGAATTGGAAAGAGTTTTTTCTGAAACTCAT
TATCCTGATATTTATACCCGAGAGGAACTCGCTTTGAAGATTGACCTTACAGAAGCTAGA
GTCCAGGTATGGTTTCAAAATCGACGTGCCAAGTGGAGAAAAATGGAGCGAGCGAAACAG
CAGCAACTGCAACCAAACTTACCCCAGGGGAGTCCCGCCTCCTCCAGCTCGGGTGACGTC
ACCAACTTGAGTTCGGAAACCGCATGTCACGATATAAATCAAAGAGGTGTGTCACTCCCA
TCTAGCGAAACAGATCTAAAATCGTGTTCCGAAACGGCCACCAACGGGGCTAGTGGTTCG
GCTGAAGAGGACCAACATCGAGATTTGCCTAGCGCTATGTCGCAATCAACATTGCAAATG
ACGGCACGCGATCAAGCGACACTTCTTAAGGTCGGACTCTCTGCTACAGGGAGCAAAAAA
TCGTCTCAGATCGATAGAAATCACGTGAATCGTAACAGCGCATCTTCATCCGTTTCTAAC
GATCTTTCTCTGGATCCGCGTTCAATGACTAATGACGACGGACTCAGTTCAAATCAATCT
TCAACTTCATGCATGCAGGGAAATCCTTTTCAGTCTTCTTATGATCAGAAACATCAGAGT
AATTCGACGAGCAATCAACAGTCACGGTCTCAGCAACGATCCTATAATGGACACAGCGAT
ATGCTGCAAGGAGCTCCTCAAGGATACTCTTCTTCTTCGTCTGTGTCTTGGCTTCTGGCA
GGAGGTGGTACAAACCCATCAAATCCTTTACACAGCGCCCCTTTCGTCGATGTGCTATCA
GCCTTGACACGCAACGTAGGCTCCTCTGCCGCAGCTGCTGCACTGATGACCTCATCACAC
ATGACATCAGGTTCCCCTACTTCACCTTCTACATCATCGTCCCTAAACGCCTATCATAAT
TATTCCGGACTGCAGGCGGTTCCGTATTATCAGGACTGCGGGAAAAATCTTCTCATGGCA
GCAGATGTATCGGGATTGCACGGAGTAAGCTTGCGAAATAATTCAAGCAATAACAATAAT
GATTGTAGAAGTAGAAGAATTATGTCATCTTCTCCGAATCTTTCGACGGATAACGTGATT
GCATTATAG

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[98-176] 1.03E-26
ProSiteProfiles
Homeobox_dom (IPR001356) - T[115-175] 20.973
SMART
Homeobox_dom (IPR001356) - T[117-179] 2.0E-27
Pfam
Homeobox_dom (IPR001356) - T[118-174] 1.6E-23
CDD
Homeobox_dom (IPR001356) - T[118-176] 5.61497E-26
ProSitePatterns
Homeobox_CS (IPR017970) - T[150-173] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DRGX_HUMAN 75.362 % 120 7.56E-31
PHX2B_HUMAN 57.459 % 180 1.14E-52
PHX2A_HUMAN 55.866 % 172 8.76E-50