Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S842.g06855.01.t

Possible name(s)

GPM6A; GPM6B

Gene model

Haaura.CG.MTP2014.S842.g06855

Location

S842 [19,960 / 21,340]

Sequences

Amino acid sequence

Length: 433

>Haaura.CG.MTP2014.S842.g06855.01.p
MSMHSIDHASGYNDDGYKGYDIGSDGQVVEFYDHTNEPSIHGGNSGVSSSRHLLNSNPGG
HSTPPARRRKRGRHNAGCCDGCVGCLITIGKLPLASAICMLMIWAGTGMFIGAGWAVLDK
TQDLFNKYGPKEGNPAIDAPPEYFLISGGGFAQNYELRNPEDLGNRVPEVFLGLQRSFIG
IIPFMFIFSIAVVVDGANSTKEIHTKGKGCKSTSSGICCGLIILAGSYLLLLFWVFFLCF
VTLGVYYYRIVMLRCDDLNNRGFNEAVQKDICIDLVQSGFIMFRNTNDQYFGKICGPGDS
SRNTVGDLSGYCDAYEHAWQLMLVCFAGCLLNVIAMMHSLMITTANYNKLQRKYSRQRHH
ETTARTVSPATTRRSAPSTIAPPAYVVGTKNGVSDQRRRSRDIELDYMGGDHESTSNGRP
PRRLENDDSHMGV

Nucleotide sequence

Length: 1,299

>Haaura.CG.MTP2014.S842.g06855.01.t
ATGTCCATGCACAGTATAGATCATGCATCTGGATATAATGACGATGGCTATAAAGGTTAT
GACATCGGCTCCGATGGTCAAGTAGTCGAGTTCTACGACCATACGAATGAGCCGAGCATC
CACGGTGGAAACAGCGGCGTAAGCAGTTCACGGCATCTGCTTAACAGCAACCCTGGTGGC
CATTCTACACCACCTGCAAGGAGACGTAAGAGAGGAAGACACAACGCAGGTTGCTGTGAC
GGATGCGTAGGTTGTCTCATTACCATCGGCAAACTGCCGCTCGCGTCTGCGATCTGCATG
TTAATGATATGGGCTGGAACAGGGATGTTCATAGGGGCGGGATGGGCGGTTCTTGATAAG
ACTCAAGATCTTTTTAATAAGTACGGACCTAAAGAAGGAAACCCAGCCATAGATGCCCCA
CCAGAATATTTCCTCATCAGTGGGGGCGGTTTCGCTCAGAATTACGAGTTGAGGAACCCG
GAGGATCTAGGGAACAGAGTCCCGGAAGTATTCCTGGGCCTGCAGCGATCTTTCATCGGG
ATAATCCCGTTCATGTTCATCTTCTCCATAGCTGTCGTGGTGGATGGGGCAAACAGCACA
AAAGAAATCCATACAAAAGGAAAAGGTTGCAAAAGCACAAGCTCTGGAATATGTTGTGGC
CTTATCATACTTGCTGGTTCATATTTACTGCTCCTCTTCTGGGTGTTCTTTCTTTGTTTT
GTAACCCTAGGCGTATACTACTACAGGATAGTGATGCTACGCTGTGACGACCTGAATAAT
CGTGGTTTCAACGAAGCAGTTCAGAAAGATATTTGCATCGACCTTGTACAATCTGGATTC
ATCATGTTCAGAAATACCAATGATCAATATTTTGGAAAAATATGTGGTCCGGGAGACTCA
AGCAGAAATACTGTGGGAGACTTGAGCGGTTACTGTGATGCTTATGAACACGCTTGGCAG
CTGATGTTAGTTTGTTTTGCCGGATGTCTTTTAAACGTGATAGCTATGATGCATTCCCTT
ATGATCACCACTGCCAACTACAACAAATTGCAACGTAAATATTCCAGACAGCGACACCAC
GAAACTACAGCAAGGACTGTGTCTCCTGCTACGACTAGGCGGTCTGCACCTTCAACTATT
GCGCCTCCAGCCTATGTCGTTGGGACAAAAAATGGAGTTAGTGATCAGAGGAGGCGATCG
CGGGACATCGAACTAGACTACATGGGTGGTGACCACGAATCGACTTCGAACGGACGCCCG
CCCAGAAGGTTGGAAAATGATGACAGCCACATGGGAGTA

InterProScan

PANTHER	Myelin_PLP (IPR001614) - T[70-366] 1.4E-44
Pfam	Myelin_PLP (IPR001614) - T[78-128] 1.3E-5 - T[173-352] 8.9E-23

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value