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  1. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S84.g01798.05.t

Possible name(s)

H3F3A; HIST2H3A; HIST2H3D

Location

S84 [63,849 / 64,357]

Sequences

Amino acid sequence

Length: 141

>Haaura.CG.MTP2014.S84.g01798.05.p
NLLKMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQ
KSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAK
RVTIMPKDIQLARRIRGERA*

Nucleotide sequence

Length: 423

>Haaura.CG.MTP2014.S84.g01798.05.t
AACCTTCTAAAAATGGCCCGTACCAAACAGACAGCAAGAAAATCTACTGGAGGCAAGGCT
CCGAGGAAGCAACTGGCTACGAAGGCGGCAAGGAAAAGTGCACCGTCTACTGGTGGAGTG
AAGAAACCCCATAGATATAGGCCCGGAACCGTTGCACTCCGTGAAATTCGTAGGTACCAG
AAATCCACAGAATTGCTGATCCGCAAATTGCCCTTTCAACGTCTTGTACGTGAAATTGCT
CAGGATTTCAAGACTGATTTGAGGTTTCAAAGCGCTGCTATCGGAGCTCTTCAGGAAGCA
AGTGAAGCCTATCTAGTTGGATTGTTTGAAGACACTAACTTGTGCGCGATTCATGCAAAG
CGAGTTACCATCATGCCGAAGGACATTCAGTTGGCGCGTAGAATACGTGGTGAAAGGGCA
TAA

InterProScan

PANTHER
Histone_H3/CENP-A (IPR000164) - T[5-140] 1.4E-92
Pfam
Histone_H2A/H2B/H3 (IPR007125) - T[5-136] 8.9E-54
Gene3D
Histone-fold (IPR009072) - T[6-140] 2.0E-79
SUPERFAMILY
Histone-fold (IPR009072) - T[6-137] 7.21E-57
PRINTS
Histone_H3/CENP-A (IPR000164) - T[7-21] 3.2E-85 - T[21-35] 3.2E-85 - T[38-59] 3.2E-85 - T[62-79] 3.2E-85 - T[84-102] 3.2E-85 - T[102-118] 3.2E-85 - T[118-139] 3.2E-85
ProSitePatterns
Histone_H3/CENP-A (IPR000164) - T[19-25] . - T[71-79] .
SMART
Histone_H3/CENP-A (IPR000164) - T[38-140] 5.4E-74

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
H32_HUMAN 97.059 % 268 2.68E-94
H31_HUMAN 96.324 % 266 1.61E-93
H33_HUMAN 100 % 274 1.09E-96





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