Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S84.g01798.06.t

Possible name(s)

H3F3A; HIST2H3A; HIST2H3D

Gene model

Haaura.CG.MTP2014.S84.g01798

Location

S84 [63,873 / 64,345]

Sequences

Amino acid sequence

Length: 129

>Haaura.CG.MTP2014.S84.g01798.06.p
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLAR

Nucleotide sequence

Length: 387

>Haaura.CG.MTP2014.S84.g01798.06.t
ATGGCCCGTACCAAACAGACAGCAAGAAAATCTACTGGAGGCAAGGCTCCGAGGAAGCAA
CTGGCTACGAAGGCGGCAAGGAAAAGTGCACCGTCTACTGGTGGAGTGAAGAAACCCCAT
AGATATAGGCCCGGAACCGTTGCACTCCGTGAAATTCGTAGGTACCAGAAATCCACAGAA
TTGCTGATCCGCAAATTGCCCTTTCAACGTCTTGTACGTGAAATTGCTCAGGATTTCAAG
ACTGATTTGAGGTTTCAAAGCGCTGCTATCGGAGCTCTTCAGGAAGCAAGTGAAGCCTAT
CTAGTTGGATTGTTTGAAGACACTAACTTGTGCGCGATTCATGCAAAGCGAGTTACCATC
ATGCCGAAGGACATTCAGTTGGCGCGT

InterProScan

PANTHER	Histone_H3/CENP-A (IPR000164) - T[1-129] 1.0E-87
Pfam	Histone_H2A/H2B/H3 (IPR007125) - T[1-129] 4.1E-52
SUPERFAMILY	Histone-fold (IPR009072) - T[2-129] 4.36E-55
Gene3D	Histone-fold (IPR009072) - T[2-129] 9.8E-76
PRINTS	Histone_H3/CENP-A (IPR000164) - T[3-17] 1.2E-80 - T[17-31] 1.2E-80 - T[34-55] 1.2E-80 - T[58-75] 1.2E-80 - T[80-98] 1.2E-80 - T[98-114] 1.2E-80 - T[114-129] 1.2E-80
ProSitePatterns	Histone_H3/CENP-A (IPR000164) - T[15-21] . - T[67-75] .
SMART	Histone_H3/CENP-A (IPR000164) - T[34-129] 2.1E-64

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
H32_HUMAN	96.899 %	254	2.43E-89
H31_HUMAN	96.124 %	252	1.94E-88
H33_HUMAN	100 %	260	1.1E-91