Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00001279' > 
  2. Clone 'cien52489' > 
  3. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S854.g06898.01.t

Possible name(s)

ZC3HC1

Gene model

Haaura.CG.MTP2014.S854.g06898

Location

S854 [7,660 / 11,979]

Sequences

Amino acid sequence

Length: 380

>Haaura.CG.MTP2014.S854.g06898.01.p
MSVQTELSSGSTEETTQTMNDFTSMPPTNMRSSESVLNQVKETLSHFMNKSESSLADKES
RAKDNNESDGNSTGERSQTPSERLRAFEAFTKRMNTFTVQNWMGKPLALSPPLLAQYGWQ
CIGLDTAKCCSCAAILTIRLPWPDTDNYRQRCFVYRQKILANHMKICTWPSYPSPDTHVT
PFLHGGEDTSKTQANFIGRRDRLLKLGKRLPELQIELLEELMLDKSSLQKLAQILSKSGG
STVIDDEIASAVKYPSMTAAILAMCGWDSKSNQSMAYPSLYCSFTARHVGLWNFFGLETM
DTESKNSSLVPVEIEEAGSKRRAEGESDVSPKKIKMSSGEMNKQHMDIEKTWFHPLQQHY
PWSPWIAVLKPVDQNEFEV*

Nucleotide sequence

Length: 1,562

>Haaura.CG.MTP2014.S854.g06898.01.t
ATGAGTGTTCAAACAGAACTCTCTTCAGGTTCAACTGAGGAAACTACCCAAACGATGAAC
GATTTCACATCAATGCCACCCACAAACATGCGATCGAGCGAATCAGTGTTAAATCAAGTT
AAAGAAACTTTGTCTCATTTCATGAACAAATCAGAAAGTTCACTTGCAGATAAAGAAAGC
AGAGCAAAAGACAATAATGAATCTGACGGGAATTCCACCGGAGAGCGCAGCCAAACTCCT
TCGGAGAGACTACGAGCCTTTGAAGCTTTCACAAAGAGAATGAATACGTTCACGGTACAA
AACTGGATGGGAAAGCCACTTGCCCTTAGTCCACCATTACTTGCGCAATATGGATGGCAA
TGCATAGGCTTAGATACGGCAAAGTGTTGCTCTTGCGCAGCCATACTGACTATAAGACTT
CCATGGCCAGATACAGATAACTATCGCCAACGTTGTTTTGTTTACAGACAAAAGATATTG
GCTAATCACATGAAAATCTGTACATGGCCTAGTTATCCTTCACCAGATACCCATGTTACA
CCATTCCTTCATGGTGGAGAAGACACCAGTAAAACACAGGCCAACTTCATTGGGAGAAGA
GATCGTTTATTGAAGCTTGGGAAAAGATTGCCGGAGTTGCAGATCGAGTTACTTGAAGAA
TTGATGCTGGACAAAAGCAGTCTTCAAAAACTCGCCCAGATTCTGTCAAAGAGCGGAGGA
AGTACAGTGATCGATGATGAAATTGCGTCTGCCGTGAAGTACCCTAGCATGACTGCTGCT
ATCTTAGCTATGTGTGGCTGGGACAGCAAGTCAAACCAGTCCATGGCTTACCCAAGCCTT
TATTGCTCATTCACTGCAAGACATGTTGGATTGTGGAATTTTTTTGGGCTAGAAACAATG
GATACGGAGAGCAAAAATTCGAGTTTGGTTCCGGTAGAAATAGAGGAAGCAGGATCCAAA
CGAAGGGCAGAAGGAGAAAGTGATGTTTCTCCTAAGAAGATCAAAATGAGCAGTGGGGAA
ATGAACAAGCAACACATGGATATTGAAAAGACTTGGTTTCATCCTTTACAGCAGCATTAT
CCATGGTCTCCTTGGATAGCAGTTTTAAAACCAGTCGATCAAAACGAATTCGAGGTATGA
AACTTTTTCAGTTCTTTTTGAGCATTATCAAGAATCTTCTACTGTTAGTGTCAACGGTGG
AAGGCAGTTATTACCAAAATAATTTATCGGTATTATAAATCTACCCGATTTCCGGTCTAG
CGAGCTAGGATAAGGATGCTGCAGCTGAGGACAATTATGTAAGTATTGTGAAACCTACAC
TACCAAATGGTAAACCAGGCTGGAGATTCGTCCGAGATACTTTGCTTGGTGAACAAAATG
AACTCTCGACTGAACATTCTTCTATCATGCTATCTTCTGGGCAAGAATTAGCCCAGAAAA
CTGATCCCGATGAGCTAAATGTTAGCATTGGTGAAAAAACAATAGCCGAGGCACCAAGGA
CCCCAAAAAATGCTGTTGTTCATGTTCGGAAAATGCTTAAAGAATGGTCATCGCCTCAAT
AG

InterProScan

Pfam
Znf_C3HC-like (IPR012935) - T[88-213] 5.6E-18
Pfam
NIPA/Rsm1 (IPR013909) - T[259-309] 2.4E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NIPA_HUMAN 31.449 % 121 1.63E-30