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TRANSCRIPT CARD

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  1. Clone 'cidg802c16' > 
  2. Clone 'AHC0AAA179YM15' > 
  3. Clone 'cien36414' > 
  4. Transcript 'Haaura.CG.MTP2014.S8...' > 
  5. Transcript 'Haaura.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S887.g07000.01.t

Possible name(s)

DLD; GSR; TXNRD1

Gene model

Haaura.CG.MTP2014.S887.g07000

Location

S887 [3,748 / 5,344]

Sequences

Amino acid sequence

Length: 532

>Haaura.CG.MTP2014.S887.g07000.01.p
RFNQFFLSDLGQIIISLYVIISVTNMLSTKLQTSLIRRFQRNTLLSVSHSCAWPNRCKTT
STQDADLVVIGSGPGGYVAAIKAAQLGMKTVCIEKNPTLGGTCLNVGCIPSKALLNNSHY
YQMAQGKDFASRGIEVGNLSLNLEKMMEQKSSAVSALTGGIAGLFKKNNIVRVQGHGQIQ
SPTQVMAVKEDGTNEVINSKNILIATGSEVTPFPGMDIDEETIISSTGALSLKKVPQKLI
LIGAGVIGVELGSVWSRLGSEVTAVEFLGHVGGMGIDMEVSKSFQRILKKQGINFKLNTK
VTTAEKTASGVKVNMEPAAGGTSETLECDVLLVCVGRRPYTIGLGLENVGVQADQRGMIP
VNQRFQTSCPSVFAIGDCIQGPMLAHKAEDEGIVCVEGMTGAPVHIDYNCVPSVIYTHPE
VGWVGKTEEDLKKDNIPYKVGKFPFAANSRAKTNADTDGFVKILSHKETDRILGAHIIGS
AAGEMINEAVLAMEYGASAEDVARVCHAHPTLSEAFREANLAAYCGKPINF*

Nucleotide sequence

Length: 1,596

>Haaura.CG.MTP2014.S887.g07000.01.t
CGATTCAACCAATTCTTTTTGTCAGATTTAGGCCAAATTATTATTTCCCTCTACGTTATC
ATCTCAGTCACTAATATGCTTTCGACGAAACTGCAAACGTCTCTGATACGTCGATTCCAG
AGAAACACACTGCTCAGCGTGTCACATTCTTGTGCTTGGCCGAATCGATGTAAGACCACA
TCGACGCAAGACGCAGACCTGGTCGTGATAGGGTCCGGCCCAGGCGGCTATGTTGCCGCA
ATCAAGGCAGCACAATTAGGTATGAAAACGGTATGCATTGAAAAAAATCCAACTCTAGGA
GGGACCTGTTTAAACGTGGGATGCATTCCATCCAAAGCTTTATTGAACAACTCTCACTAC
TACCAAATGGCACAAGGAAAAGATTTCGCCTCACGAGGAATCGAAGTGGGAAATTTATCC
CTCAATCTAGAAAAAATGATGGAGCAAAAGTCATCTGCTGTGTCTGCGTTGACTGGTGGA
ATCGCCGGTCTTTTCAAAAAGAACAACATTGTTCGTGTGCAAGGACATGGGCAAATCCAG
AGCCCCACTCAGGTGATGGCAGTAAAAGAAGACGGGACTAATGAAGTAATTAATTCCAAA
AATATCCTCATTGCTACCGGTTCGGAAGTCACTCCGTTTCCGGGCATGGACATCGATGAA
GAAACTATAATCTCATCCACTGGAGCACTAAGTTTAAAAAAAGTTCCACAAAAATTAATT
TTGATAGGTGCAGGAGTGATAGGAGTTGAACTCGGTTCAGTCTGGTCCAGGCTTGGATCC
GAAGTCACTGCTGTCGAGTTTCTCGGTCACGTCGGCGGCATGGGTATCGATATGGAAGTG
TCGAAATCATTTCAGCGAATTCTTAAAAAGCAGGGAATTAATTTTAAATTGAACACGAAA
GTGACTACAGCAGAAAAAACAGCATCAGGAGTCAAGGTGAATATGGAGCCAGCAGCAGGG
GGTACTTCGGAGACCTTGGAATGCGATGTCTTGTTGGTTTGCGTCGGGAGGCGGCCTTAC
ACGATCGGACTAGGCTTAGAGAACGTTGGCGTTCAGGCGGACCAACGCGGCATGATACCG
GTTAACCAAAGATTCCAGACATCGTGTCCCAGCGTATTCGCCATTGGTGATTGTATACAA
GGTCCTATGCTTGCACATAAAGCCGAGGATGAAGGAATTGTCTGCGTAGAAGGGATGACC
GGGGCCCCGGTGCACATTGATTACAACTGTGTTCCCTCTGTCATCTACACTCACCCAGAA
GTCGGTTGGGTTGGAAAAACAGAAGAAGATCTGAAGAAAGATAATATTCCGTATAAAGTA
GGCAAATTCCCTTTTGCTGCTAACAGCAGAGCGAAGACTAACGCCGATACGGATGGCTTC
GTCAAGATCTTGAGCCATAAAGAAACTGATCGCATCTTAGGGGCTCACATTATCGGGAGT
GCAGCGGGAGAGATGATCAACGAGGCCGTGCTCGCCATGGAGTACGGTGCATCTGCTGAA
GATGTCGCACGAGTTTGCCATGCTCATCCTACGCTTTCTGAAGCTTTCAGAGAGGCCAAC
CTCGCTGCCTATTGTGGCAAGCCAATCAACTTTTGA

InterProScan

PIRSF
Pyr_nuc-diS_OxRdtase (IPR001100) - T[27-524] 4.3E-95
SUPERFAMILY
FAD/NAD-bd_sf (IPR036188) - T[60-428] 3.28E-60
TIGRFAM
Lipoamide_DH (IPR006258) - T[65-529] 1.3E-164
Pfam
FAD/NAD-binding_dom (IPR023753) - T[66-392] 3.1E-67
Gene3D
FAD/NAD-bd_sf (IPR036188) - T[66-210] 4.5E-125 - T[211-335] 4.5E-125 - T[336-393] 4.5E-125
ProSitePatterns
Pyr_OxRdtase_I_AS (IPR012999) - T[100-110] .
SUPERFAMILY
FAD/NAD-linked_Rdtase_dimer_sf (IPR016156) - T[407-524] 8.76E-44
Gene3D
FAD/NAD-linked_Rdtase_dimer_sf (IPR016156) - T[408-531] 2.4E-48
Pfam
Pyr_nucl-diS_OxRdtase_dimer (IPR004099) - T[411-519] 9.2E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRXR3_HUMAN 28.341 % 144 4.69E-37
GSHR_HUMAN 29.095 % 160 3.31E-43
DLDH_HUMAN 71.457 % 748 0