- Transcript 'Haaura.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S890.g07010.01.t
Possible name(s)
ABCD2; ABCD3; ABCD4
Gene model
Location
S890 [5,761 / 13,344]
Amino acid sequence
Length: 616
>Haaura.CG.MTP2014.S890.g07010.01.p
MSACTSSSASFGLLFFKRQWRLFGIIFGSFKSSNSIVFYALVVLSLLMQIIIYEAGLIPS
MYFEVLGAKDYAEFKRVAVYSVEIIVLNAVMKSTLTYVSRRLYIKWRRVLCSYFHDNYFT
RTEYYRLNVLDPKLDNIDQRIIRDSNIFCQEWSGLLSRLVVIPFTIVYYTYQCFISTTYL
GPIIIYVYFIGGTIINRFVMAPIVKLTMQQETHEGNFKFQHYQVRANAEPMAFLNAGETE
KFKSNRRLENILKTLKKLYGWSFWLNTSVNIFDYVGGILSYLIIAIPIFAGDYDDLAPEE
LSAVISRNSFVCIYLIHSFSQLIDMSRIFGSIAGHTHRLGELLEEFQTGDVLQKSPNNDL
NEHDKHDSSINPSSGNYQQFFNEEEWSEANDNVPEMTLSVSDSEKICFKLTNVTYGTPDG
ATKLLRTLDLVISEGNNLLVTGKTGSGKSSLFRVICGLWKPLEGDVKICCDPGPQGVMFL
PQKALFTDGTLKQQIVYPNLDGYEEYSLSTDDGKIREILDEVGLSDLCARAEGLDTSSLI
NWSDKLSPGEMQRLSFARLFYHRPRFAVMDEPTSALDSKIIEVLFNLCKEKNITYITAGH
GEALLQVFMSFQQSGY
Nucleotide sequence
Length: 1,848
>Haaura.CG.MTP2014.S890.g07010.01.t
ATGTCCGCCTGTACCTCATCTTCGGCAAGCTTCGGTCTTCTTTTCTTCAAGAGGCAGTGG
CGGTTGTTTGGCATTATTTTCGGCAGCTTCAAGTCTTCAAATTCTATCGTGTTTTACGCT
CTGGTGGTTCTGTCTCTCTTGATGCAAATCATCATTTATGAAGCCGGCTTGATCCCATCA
ATGTATTTCGAAGTATTGGGTGCAAAAGACTATGCAGAATTCAAACGAGTCGCTGTGTAT
TCCGTTGAAATCATAGTTCTAAATGCAGTAATGAAGAGCACGTTAACTTATGTGTCACGG
AGATTGTACATTAAATGGAGACGTGTGCTTTGCAGCTATTTTCATGACAACTATTTCACA
AGGACCGAATACTACAGATTGAATGTTCTTGATCCAAAGCTAGATAACATTGATCAAAGG
ATTATCCGCGACTCCAATATTTTTTGCCAAGAATGGAGCGGACTTTTGTCACGTCTCGTC
GTTATACCGTTCACCATTGTCTACTACACCTATCAATGCTTCATCAGTACTACTTATCTT
GGGCCGATTATTATCTATGTTTATTTCATCGGCGGAACGATCATAAACAGATTCGTCATG
GCACCTATAGTCAAGCTGACGATGCAGCAAGAAACACACGAAGGAAATTTTAAGTTTCAA
CACTATCAGGTGCGTGCCAATGCAGAACCAATGGCGTTCCTCAACGCGGGCGAAACAGAA
AAATTCAAAAGCAATCGAAGGTTAGAAAATATCCTCAAGACTCTGAAAAAGCTCTACGGA
TGGTCGTTTTGGCTGAATACTTCCGTGAATATCTTCGATTATGTTGGTGGAATACTCAGT
TATCTCATAATAGCAATACCGATATTCGCTGGCGATTATGACGACTTGGCTCCGGAGGAA
CTCAGCGCAGTTATCAGCAGGAACTCATTCGTATGTATTTATCTCATTCATTCCTTCTCC
CAATTAATCGACATGTCCAGAATATTTGGAAGCATAGCAGGACACACACACAGATTAGGA
GAATTATTAGAAGAATTTCAGACTGGCGACGTTTTACAGAAGTCTCCCAACAATGACTTA
AATGAACATGACAAACATGATTCCTCAATCAATCCTTCCAGTGGGAACTATCAGCAATTT
TTCAATGAAGAGGAATGGAGTGAAGCAAACGACAATGTGCCTGAGATGACATTATCCGTA
TCTGATTCTGAAAAGATATGCTTCAAGCTTACCAATGTAACATATGGAACGCCCGACGGA
GCAACCAAGTTACTAAGAACGCTCGACTTGGTAATTTCTGAGGGGAACAACTTACTTGTC
ACAGGAAAAACCGGTTCTGGGAAATCTTCCCTTTTTCGTGTTATTTGCGGATTGTGGAAA
CCTCTTGAGGGCGATGTGAAAATTTGTTGCGATCCTGGACCTCAGGGAGTGATGTTTTTG
CCACAAAAAGCATTGTTTACTGACGGAACACTGAAACAACAAATCGTTTATCCAAATCTT
GATGGATATGAAGAATACTCATTGTCCACTGACGATGGGAAAATTAGAGAAATTCTTGAT
GAAGTTGGACTGAGTGATTTGTGTGCAAGAGCAGAGGGTCTAGATACAAGCAGTTTGATC
AATTGGTCCGATAAATTATCACCTGGAGAAATGCAAAGGTTGTCATTTGCAAGACTATTC
TACCACCGCCCAAGATTTGCAGTAATGGATGAGCCAACCAGTGCGCTGGACAGCAAGATT
ATCGAAGTCTTATTTAATCTATGTAAAGAAAAAAACATAACTTACATTACGGCAGGACAC
GGTGAAGCGCTTCTTCAGGTATTTATGAGTTTTCAACAGTCTGGTTAC
| Pfam |
ABC1_TM_dom (IPR011527) - T[11-289] 1.6E-61 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[24-325] 1.57E-12 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[136-306] 9.967 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[405-605] 5.12E-31 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[408-616] 12.605 |
| Pfam |
ABC_transporter-like (IPR003439) - T[426-574] 5.3E-18 |
| SMART |
AAA+_ATPase (IPR003593) - T[434-615] 1.2E-5 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[546-560] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCD4_HUMAN | 44.932 % | 513 | 2.79E-176 |
| ABCD3_HUMAN | 26.679 % | 195 | 3.58E-54 |
| ABCD2_HUMAN | 24.209 % | 173 | 4.94E-46 |