- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Haaura.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C11.389.v2...' >
- Transcript 'KH2012:KH.S389.1.v3....' >
- Transcript 'Haaura.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S8.g00289.01.t
Possible name(s)
DDX10; DDX18; DDX55
Gene model
Location
S8 [169,853 / 173,909]
Amino acid sequence
Length: 764
>Haaura.CG.MTP2014.S8.g00289.01.p
MDKDLTEVEKLEEWKEKKQRNRDNKLKNSKKIFVRRRKWRDEVDEIQELEKSYEEFDIAK
AEHFNDFPLSSKTKMGLEKAKYATPTAIQRACFLPSVKGGDILGAAKTGSGKTLAFLIPV
LECLFRQRWTAIAGPGALIISPTRELAYQTFEVLKKVGLYHDFSAGLVIGGKDVKSEAAH
MCRTNILVCTPGRLLQHMDETSYFDASSLQILVLDEADRILDLGFKATVNAILENLPTDK
QTLLFSATQTKSVKDLARLSLKNPSYISVHEKSRTSTPSGLNQKYIVCKLEDKLNVLFSF
VKNHLKAKTIVFLTSCKQVQYIYAAFCKLRPGVPVMMLHGRMNQMKRMAVYDEFCRKQFA
LLFCTDVAARGLDIPAVDWVVQLDCPEDAETYIHRAGRTARNHGEGQALLLFLESEEEAM
VKQLQDRKVPISKTEINLEKITKINSRLESFCAAEQELKERAQRCFVSYIRSIFLMKNKS
VFSVQSLSFSEYAASLGLAVTPRDFINTSSTLFTADDVSSDNEGDMFVVKRKDVFGLGSS
STVEEKTEISTEQKDDNRTLSKAAQAKKLLKKKYKYNQKILFDKDGELTESWPPVDPNEY
KNITENIDEGEEDGIDIEKVKLEMKERDTSDRQRHRDKIRQKHQEKRRKDKELRRQLQAK
KEGRYYGKDDDQEVIAYLGSPDSSNVDESKSTEFAERDDVTVNPESIPLKRSSYHLRGDE
DEKESKSKRLNTDGSVTLSDLMNDAGLSLREEEDLALHFLKQN*
Nucleotide sequence
Length: 2,292
>Haaura.CG.MTP2014.S8.g00289.01.t
ATGGATAAAGATCTGACCGAAGTCGAGAAACTTGAAGAATGGAAAGAAAAGAAACAACGG
AACAGAGACAACAAGCTGAAAAATTCCAAGAAAATCTTCGTAAGAAGAAGAAAATGGCGG
GATGAGGTTGATGAAATACAAGAACTGGAGAAGAGTTACGAAGAGTTTGACATTGCGAAG
GCAGAGCATTTTAATGATTTTCCCCTCTCAAGTAAAACGAAAATGGGATTGGAAAAGGCA
AAGTACGCAACCCCAACAGCTATTCAGCGTGCTTGCTTTCTGCCCTCTGTCAAAGGAGGA
GATATACTAGGTGCAGCTAAAACTGGCTCTGGAAAAACATTAGCATTTTTGATACCGGTT
TTGGAATGTTTGTTTCGTCAACGATGGACAGCTATCGCCGGTCCGGGTGCACTCATCATT
TCTCCCACCAGAGAACTTGCTTATCAAACATTTGAAGTTTTGAAAAAGGTGGGTCTTTAT
CATGATTTTTCTGCTGGTCTTGTGATTGGTGGAAAAGACGTCAAGTCTGAAGCAGCCCAC
ATGTGTCGGACGAACATATTGGTCTGCACGCCTGGAAGACTTCTTCAACATATGGATGAA
ACGTCATATTTCGATGCATCTAGTTTACAAATACTAGTGCTGGATGAAGCTGACCGAATT
CTTGATCTTGGTTTCAAAGCAACTGTTAATGCAATCTTGGAGAATCTTCCAACAGACAAA
CAAACTCTTCTTTTCTCTGCAACTCAAACTAAGTCGGTTAAAGACCTCGCTCGTCTCAGT
CTCAAAAATCCATCTTACATATCAGTCCATGAAAAATCAAGAACCAGCACCCCATCAGGG
CTCAATCAAAAGTATATCGTGTGCAAACTCGAAGACAAATTGAATGTGTTGTTTTCATTC
GTGAAGAATCATTTGAAAGCAAAAACTATTGTGTTTTTAACGTCATGTAAACAGGTACAA
TACATATACGCGGCCTTTTGCAAGCTGCGTCCTGGTGTCCCTGTCATGATGCTTCACGGA
CGTATGAACCAGATGAAGAGGATGGCGGTATATGACGAGTTTTGCCGAAAACAGTTTGCT
CTATTGTTCTGTACTGATGTTGCAGCGAGAGGTTTAGATATTCCGGCTGTGGACTGGGTT
GTGCAGCTTGATTGTCCGGAGGATGCAGAGACCTACATTCATCGGGCTGGACGAACGGCT
CGAAATCATGGAGAAGGACAGGCTTTGCTCCTTTTCTTAGAATCTGAAGAAGAAGCAATG
GTCAAGCAGTTGCAGGATAGAAAGGTGCCGATATCAAAGACTGAAATAAATTTAGAAAAA
ATAACAAAAATTAATTCGAGGTTAGAGTCATTTTGTGCCGCCGAACAAGAATTGAAAGAA
AGAGCGCAAAGATGTTTTGTTTCATACATTCGTTCTATCTTCCTCATGAAGAATAAGTCT
GTTTTTTCTGTACAATCATTGTCATTTTCTGAGTATGCTGCTTCACTTGGCCTTGCTGTC
ACGCCTAGAGACTTCATAAATACTTCAAGCACTCTCTTTACTGCTGATGATGTATCCAGT
GATAATGAAGGAGATATGTTTGTTGTGAAGAGAAAAGATGTATTTGGTTTAGGCTCTTCC
AGCACTGTTGAGGAAAAAACAGAAATTTCAACTGAACAAAAAGATGACAATAGGACATTA
TCAAAGGCAGCACAAGCAAAGAAATTATTGAAAAAGAAATACAAGTACAATCAGAAAATA
TTGTTTGATAAAGATGGAGAATTAACAGAATCTTGGCCTCCTGTTGATCCGAATGAATAC
AAGAATATCACAGAAAATATTGACGAAGGTGAAGAAGACGGAATTGATATTGAGAAGGTC
AAGCTGGAAATGAAAGAACGTGACACATCAGATCGGCAAAGACACCGAGACAAGATCCGA
CAAAAGCACCAAGAAAAAAGAAGGAAAGATAAAGAATTAAGAAGGCAACTGCAAGCAAAG
AAAGAAGGCAGATATTACGGAAAAGATGATGATCAAGAAGTCATTGCTTATCTTGGTAGT
CCTGATTCGAGTAATGTGGATGAATCAAAGTCGACAGAATTTGCTGAAAGGGATGATGTG
ACTGTAAATCCCGAGAGCATTCCCTTGAAACGTAGTAGCTATCATTTGAGAGGAGATGAA
GATGAAAAGGAAAGTAAAAGCAAGAGATTAAATACAGATGGCTCCGTTACACTATCAGAT
CTCATGAATGATGCTGGCCTGTCCTTGCGTGAGGAGGAAGATTTGGCTTTACATTTTTTG
AAGCAAAATTAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[62-90] 8.978 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[81-284] 9.9E-49 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[86-256] 3.7E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[93-267] 29.987 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[134-424] 1.28E-65 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[213-221] . |
| CDD |
Helicase_C (IPR001650) - T[281-408] 3.66782E-33 |
| Pfam |
Helicase_C (IPR001650) - T[292-402] 1.9E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[293-442] 20.702 |
| SMART |
Helicase_C (IPR001650) - T[321-403] 2.0E-27 |
| SMART |
DUF4217 (IPR025313) - T[443-506] 2.1E-19 |
| Pfam |
DUF4217 (IPR025313) - T[444-503] 1.3E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 63.226 % | 634 | 0 |
| DDX18_HUMAN | 44.27 % | 371 | 1.97E-118 |
| DDX55_HUMAN | 38.631 % | 288 | 1.58E-87 |