- Clone 'ma173h02' >
- Transcript 'KH2012:KH.C5.184.v1....' >
- Transcript 'Haaura.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S8.g00289.02.t
Possible name(s)
DDX10; DDX18; DDX55
Gene model
Location
S8 [169,853 / 173,909]
Amino acid sequence
Length: 795
>Haaura.CG.MTP2014.S8.g00289.02.p
MDKDLTEVEKLEEWKEKKQRNRDNKLKNSKKIFVRRRKWRDEVDEIQELEKSYEEFDIAK
AEHFNDFPLSSKTKMGLEKAKYATPTAIQRACFLPSVKGGDILGAAKTGSGKTLAFLIPV
LECLFRQRWTAIAGPGALIISPTRELAYQTFEVLKKVGLYHDFSAGLVIGGKDVKSEAAH
MCRTNILVCTPGRLLQHMDETSYFDASSLQILVLDEADRILDLGFKATVNAILENLPTDK
QTLLFSATQTKSVKDLARLSLKNPSYISVHEKSRTSTPSGLNQKYIVCKLEDKLNVLFSF
VKNHLKAKTIVFLTSCKQVQYIYAAFCKLRPGVPVMMLHGRMNQMKRMAVYDEFCRKQFA
LLFCTDVAARGLDIPAVDWVVQLDCPEDAETYIHRAGRTARNHGEGQALLLFLESEEEAM
VKQLQDRKVPISKTEINLEKITKINSRLESFCAAEQELKERAQRCFVSYIRSIFLMKNKS
VFSVQSLSFSEYAASLGLAVTPRVRFLQRQGKQGQSNIHAKVEEKNPENNNDNKDFINTS
STLFTADDVSSDNEGDMFVVKRKDVFGLGSSSTVEEKTEISTEQKDDNRTLSKAAQAKKL
LKKKYKYNQKILFDKDGELTESWPPVDPNEYKNITENIDEGEEDGIDIEKVKLEMKERDT
SDRQRHRDKIRQKHQEKRRKDKELRRQLQAKKEGRYYGKDDDQEVIAYLGSPDSSNVDES
KSTEFAERDDVTVNPESIPLKRSSYHLRGDEDEKESKSKRLNTDGSVTLSDLMNDAGLSL
REEEDLALHFLKQN*
Nucleotide sequence
Length: 2,385
>Haaura.CG.MTP2014.S8.g00289.02.t
ATGGATAAAGATCTGACCGAAGTCGAGAAACTTGAAGAATGGAAAGAAAAGAAACAACGG
AACAGAGACAACAAGCTGAAAAATTCCAAGAAAATCTTCGTAAGAAGAAGAAAATGGCGG
GATGAGGTTGATGAAATACAAGAACTGGAGAAGAGTTACGAAGAGTTTGACATTGCGAAG
GCAGAGCATTTTAATGATTTTCCCCTCTCAAGTAAAACGAAAATGGGATTGGAAAAGGCA
AAGTACGCAACCCCAACAGCTATTCAGCGTGCTTGCTTTCTGCCCTCTGTCAAAGGAGGA
GATATACTAGGTGCAGCTAAAACTGGCTCTGGAAAAACATTAGCATTTTTGATACCGGTT
TTGGAATGTTTGTTTCGTCAACGATGGACAGCTATCGCCGGTCCGGGTGCACTCATCATT
TCTCCCACCAGAGAACTTGCTTATCAAACATTTGAAGTTTTGAAAAAGGTGGGTCTTTAT
CATGATTTTTCTGCTGGTCTTGTGATTGGTGGAAAAGACGTCAAGTCTGAAGCAGCCCAC
ATGTGTCGGACGAACATATTGGTCTGCACGCCTGGAAGACTTCTTCAACATATGGATGAA
ACGTCATATTTCGATGCATCTAGTTTACAAATACTAGTGCTGGATGAAGCTGACCGAATT
CTTGATCTTGGTTTCAAAGCAACTGTTAATGCAATCTTGGAGAATCTTCCAACAGACAAA
CAAACTCTTCTTTTCTCTGCAACTCAAACTAAGTCGGTTAAAGACCTCGCTCGTCTCAGT
CTCAAAAATCCATCTTACATATCAGTCCATGAAAAATCAAGAACCAGCACCCCATCAGGG
CTCAATCAAAAGTATATCGTGTGCAAACTCGAAGACAAATTGAATGTGTTGTTTTCATTC
GTGAAGAATCATTTGAAAGCAAAAACTATTGTGTTTTTAACGTCATGTAAACAGGTACAA
TACATATACGCGGCCTTTTGCAAGCTGCGTCCTGGTGTCCCTGTCATGATGCTTCACGGA
CGTATGAACCAGATGAAGAGGATGGCGGTATATGACGAGTTTTGCCGAAAACAGTTTGCT
CTATTGTTCTGTACTGATGTTGCAGCGAGAGGTTTAGATATTCCGGCTGTGGACTGGGTT
GTGCAGCTTGATTGTCCGGAGGATGCAGAGACCTACATTCATCGGGCTGGACGAACGGCT
CGAAATCATGGAGAAGGACAGGCTTTGCTCCTTTTCTTAGAATCTGAAGAAGAAGCAATG
GTCAAGCAGTTGCAGGATAGAAAGGTGCCGATATCAAAGACTGAAATAAATTTAGAAAAA
ATAACAAAAATTAATTCGAGGTTAGAGTCATTTTGTGCCGCCGAACAAGAATTGAAAGAA
AGAGCGCAAAGATGTTTTGTTTCATACATTCGTTCTATCTTCCTCATGAAGAATAAGTCT
GTTTTTTCTGTACAATCATTGTCATTTTCTGAGTATGCTGCTTCACTTGGCCTTGCTGTC
ACGCCTAGAGTAAGGTTCCTGCAAAGACAAGGAAAGCAGGGGCAATCAAACATTCATGCG
AAAGTAGAAGAAAAAAATCCAGAAAATAACAATGACAACAAGGACTTCATAAATACTTCA
AGCACTCTCTTTACTGCTGATGATGTATCCAGTGATAATGAAGGAGATATGTTTGTTGTG
AAGAGAAAAGATGTATTTGGTTTAGGCTCTTCCAGCACTGTTGAGGAAAAAACAGAAATT
TCAACTGAACAAAAAGATGACAATAGGACATTATCAAAGGCAGCACAAGCAAAGAAATTA
TTGAAAAAGAAATACAAGTACAATCAGAAAATATTGTTTGATAAAGATGGAGAATTAACA
GAATCTTGGCCTCCTGTTGATCCGAATGAATACAAGAATATCACAGAAAATATTGACGAA
GGTGAAGAAGACGGAATTGATATTGAGAAGGTCAAGCTGGAAATGAAAGAACGTGACACA
TCAGATCGGCAAAGACACCGAGACAAGATCCGACAAAAGCACCAAGAAAAAAGAAGGAAA
GATAAAGAATTAAGAAGGCAACTGCAAGCAAAGAAAGAAGGCAGATATTACGGAAAAGAT
GATGATCAAGAAGTCATTGCTTATCTTGGTAGTCCTGATTCGAGTAATGTGGATGAATCA
AAGTCGACAGAATTTGCTGAAAGGGATGATGTGACTGTAAATCCCGAGAGCATTCCCTTG
AAACGTAGTAGCTATCATTTGAGAGGAGATGAAGATGAAAAGGAAAGTAAAAGCAAGAGA
TTAAATACAGATGGCTCCGTTACACTATCAGATCTCATGAATGATGCTGGCCTGTCCTTG
CGTGAGGAGGAAGATTTGGCTTTACATTTTTTGAAGCAAAATTAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[62-90] 8.978 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[81-284] 9.9E-49 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[86-256] 3.9E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[93-267] 29.987 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[134-424] 1.42E-65 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[213-221] . |
| CDD |
Helicase_C (IPR001650) - T[281-408] 3.98537E-33 |
| Pfam |
Helicase_C (IPR001650) - T[292-402] 2.0E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[293-442] 20.702 |
| SMART |
Helicase_C (IPR001650) - T[321-403] 2.0E-27 |
| SMART |
DUF4217 (IPR025313) - T[443-506] 1.6E-21 |
| Pfam |
DUF4217 (IPR025313) - T[444-504] 4.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 61.323 % | 649 | 0 |
| DDX18_HUMAN | 45.139 % | 371 | 4.89E-118 |
| DDX55_HUMAN | 38.661 % | 289 | 1.15E-87 |