- Clone 'AHC0AAA149YI21' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S929.g07135.02.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
S929 [19,613 / 20,898]
Amino acid sequence
Length: 399
>Haaura.CG.MTP2014.S929.g07135.02.p
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPEVAKPEGKDYAIHKLILGTHTS
DEQNHLIIASVQLPTDDATFDASHYDSDRGEFGGFGSVSGKIEIETKINHEGEVNRARYM
PQRPCIIGTKTPSSDVLVFDITKHPNKPDPNGICKPDIRLKGHQKEGYGLSWNPSMPGHL
LSASDDHTICLWDVRDKPKDARELLAKSVFTGHTAVVEDVSWHLLHDSLFGSVADDQKLL
IWDTRCPNTNKPSHIVEAHTAEVNCLSFNPFSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH
TAKISDFSWNINEPWVICSVSEDNIMQVWQMAENIYNDE
Nucleotide sequence
Length: 1,197
>Haaura.CG.MTP2014.S929.g07135.02.t
GAAAGAGTGATCAATGAGGAATATAAAATATGGAAGAAAAACACTCCCTTTTTATATGAC
CTCGTTATGACGCATGCTCTAGAATGGCCCAGTCTCACTGTTCAGTGGTTGCCTGAAGTT
GCAAAGCCAGAAGGCAAGGATTATGCAATACACAAATTGATATTGGGAACACACACGTCC
GATGAACAGAACCATCTTATTATTGCTAGCGTTCAACTCCCGACAGACGATGCCACTTTC
GATGCTTCTCATTATGATAGTGACAGGGGGGAATTTGGAGGGTTTGGGTCGGTCAGTGGT
AAAATTGAAATCGAGACCAAAATAAATCACGAAGGGGAAGTCAATCGTGCACGTTACATG
CCTCAAAGGCCATGCATCATCGGCACTAAAACGCCTTCTAGCGACGTCCTCGTTTTTGAT
ATCACAAAACACCCAAACAAGCCTGACCCAAACGGCATCTGCAAGCCGGACATAAGGCTT
AAGGGACACCAAAAAGAAGGATATGGGCTGTCGTGGAACCCCAGCATGCCAGGTCATCTC
CTGAGTGCCTCTGATGATCACACCATCTGTCTCTGGGACGTGAGGGATAAACCGAAGGAT
GCACGTGAGCTCCTTGCTAAATCCGTATTTACAGGGCACACGGCTGTTGTGGAAGACGTG
TCGTGGCATTTGCTCCACGACAGTTTGTTCGGATCAGTGGCTGACGACCAAAAGCTTCTC
ATTTGGGACACAAGATGCCCAAACACAAATAAACCGAGTCACATAGTAGAGGCACACACA
GCCGAGGTTAACTGCTTATCTTTTAATCCGTTCAGTGAATTCATACTGGCGACTGGTTCT
GCTGATAAGACTGTTGCATTATGGGATTTGAGAAATCTCAAACTGAAATTGCATTCCTTC
GAATCTCACAAAGACGAGATATTCCAGGTGCAGTGGTCGCCTCATAATGAGACCATTCTC
GCATCAAGCGGCACCGACCGTCGTCTCAACGTGTGGGATCTCAGCAAGATTGGTGAGGAG
CAGTCAGCAGAAGACGCTGAGGATGGGCCTCCTGAACTACTGTTCATTCATGGTGGACAC
ACTGCTAAAATATCTGACTTTTCTTGGAACATCAATGAGCCGTGGGTGATATGTTCCGTG
TCAGAAGACAACATCATGCAAGTGTGGCAAATGGCTGAAAATATATACAATGATGAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-399] 2.2E-162 |
| Pfam |
Histone-bd_RBBP4_N (IPR022052) - T[6-74] 2.2E-27 |
| SMART |
WD40_repeat (IPR001680) - T[101-140] 120.0 - T[153-193] 4.8E-6 - T[203-243] 0.044 - T[249-289] 1.1E-9 - T[293-333] 7.0E-7 - T[350-390] 0.011 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[107-394] 7.0E-51 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[160-195] 11.544 - T[210-245] 8.537 - T[256-292] 13.65 - T[300-342] 12.948 |
| Pfam |
WD40_repeat (IPR001680) - T[160-193] 0.067 - T[251-289] 7.4E-7 - T[297-333] 3.2E-4 - T[354-389] 0.083 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[160-399] 33.485 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[180-194] . - T[276-290] . - T[320-334] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[180-194] 1.2E-8 - T[276-290] 1.2E-8 - T[320-334] 1.2E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 28.041 % | 118 | 1.5E-29 |
| RBBP7_HUMAN | 85.213 % | 723 | 0 |
| RBBP4_HUMAN | 87.97 % | 744 | 0 |