- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S934.g07146.01.t
Possible name(s)
OPN1LW; OPN1MW2; OPN1MW3
Gene model
Location
S934 [5,000 / 7,010]
Amino acid sequence
Length: 368
>Haaura.CG.MTP2014.S934.g07146.01.p
MNNLLNDISTGKFDDYFYNDTEGLEENSTYSNESDAPAEWDPWHPPYAVRVNRTYYSLVA
IYMSFLFFFAFILNMLVLYTAYKNRILRTPLNYIILNLTVADLLSVVFSCFVGISTNASG
RFFFGKWMCQAEGYLASVSGITGLVSIAVMAFERYFVICKPFGPVRFSENHAILGIVFSW
LYSLGWNSPPLIFWDGYEAEGLGTTCAPNYFVTDPGKRLFIVMYFVFCFIIPFAAIFLSY
GKLIMTLRQMAKESSVSKSSNVSADQEVTKMVVMMVAAFTFCWLPYSIVSMMTVFSENKN
YALGAIPAFFAKSASIYNPLIYIGLNRQFRDCTIKALFNGKNPWSDEIGTTSSMMSTTSA
TTTLSTNK
Nucleotide sequence
Length: 1,104
>Haaura.CG.MTP2014.S934.g07146.01.t
ATGAACAACTTACTGAACGACATATCGACTGGAAAATTTGACGACTATTTTTACAATGAT
ACTGAAGGATTAGAAGAGAACAGCACGTATTCAAACGAATCTGATGCGCCTGCCGAATGG
GATCCGTGGCACCCACCGTACGCTGTTCGTGTAAATCGCACCTATTATTCTCTCGTGGCT
ATCTACATGTCGTTCTTATTTTTCTTCGCATTCATTCTCAACATGCTCGTGCTCTATACG
GCATACAAAAATCGGATTCTTCGAACTCCGTTGAACTATATCATTCTGAATCTGACTGTG
GCCGATTTGCTCTCCGTTGTTTTCAGTTGCTTCGTCGGGATTTCGACTAACGCTTCCGGT
CGCTTCTTCTTCGGCAAATGGATGTGCCAGGCTGAAGGATATCTGGCTTCAGTTTCCGGT
ATCACTGGCTTGGTATCGATTGCTGTGATGGCGTTCGAGCGATACTTCGTAATCTGTAAG
CCATTTGGACCCGTACGATTTTCGGAGAATCATGCTATACTGGGCATCGTATTTTCTTGG
TTATATTCCCTCGGCTGGAACTCACCACCGCTGATATTCTGGGACGGTTACGAAGCTGAA
GGTTTGGGAACTACCTGTGCTCCCAATTACTTCGTAACCGATCCGGGAAAACGACTCTTC
ATTGTTATGTACTTCGTCTTCTGCTTCATCATCCCGTTCGCTGCCATTTTTCTGTCGTAT
GGCAAACTGATTATGACGCTCCGACAGATGGCTAAAGAGTCGTCAGTGTCAAAATCCAGT
AACGTAAGCGCCGATCAAGAAGTTACGAAAATGGTGGTAATGATGGTGGCGGCTTTCACA
TTCTGCTGGCTCCCGTACTCCATAGTTTCGATGATGACCGTGTTTAGTGAGAACAAAAAT
TACGCTCTCGGTGCCATTCCAGCTTTCTTCGCCAAGTCCGCTTCCATTTACAATCCCCTT
ATTTACATAGGACTGAACAGACAATTCCGTGACTGCACCATCAAGGCACTCTTCAACGGA
AAGAATCCTTGGAGCGACGAAATAGGTACTACAAGCTCTATGATGTCAACCACCTCAGCA
ACGACCACGCTGAGCACAAACAAA
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[58-82] 1.8E-35 - T[91-112] 1.8E-35 - T[136-158] 1.8E-35 - T[171-192] 1.8E-35 - T[221-244] 1.8E-35 - T[268-292] 1.8E-35 - T[304-330] 1.8E-35 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[73-322] 38.847 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[74-322] 2.9E-44 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[142-158] . |
| ProSitePatterns |
Retinal_BS (IPR027430) - T[306-322] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OPSR_HUMAN | 38.983 % | 245 | 1.45E-78 |
| OPSG3_HUMAN | 37.96 % | 241 | 7.6E-77 |
| OPSG_HUMAN | 37.96 % | 241 | 7.6E-77 |