Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S93.g01926.01.t

Possible name(s)

MPDU1; PQLC3

Gene model

Haaura.CG.MTP2014.S93.g01926

Location

S93 [35,787 / 36,516]

Sequences

Amino acid sequence

Length: 243

>Haaura.CG.MTP2014.S93.g01926.01.p
MELIKSASTLVMSEKCYETFFVDFNFFHADCLKMVISKVLGYSIILGAILVKVPQIQKIV
KARSAVGISFTSLLLELHAITSMLSYSIARSFPFSTWGDSFFLMVQVVILGALINYYKGK
SGVAVIFVLIYGIILYVLISGLTPISVLSALQASNMPAIVIAKLIQAAENIKNGHTGHLS
AITVYLTFIGSAARIFTSIQETGDMLVIATYIVSTTVNGVIAFQMYWYWTATEKYMQKPK
KD*

Nucleotide sequence

Length: 729

>Haaura.CG.MTP2014.S93.g01926.01.t
ATGGAGTTAATCAAAAGTGCTTCCACACTCGTCATGTCAGAGAAATGCTACGAGACTTTT
TTCGTGGACTTTAATTTCTTCCACGCTGATTGTTTGAAGATGGTCATTAGCAAAGTGCTT
GGTTACTCCATCATACTTGGAGCAATCTTGGTAAAAGTTCCGCAGATACAAAAGATCGTT
AAAGCAAGAAGTGCAGTTGGAATCAGCTTTACCTCCTTGTTGTTAGAGCTGCATGCCATT
ACGTCCATGTTGTCTTACAGTATTGCACGGAGCTTTCCTTTCAGCACTTGGGGAGATTCT
TTCTTTCTTATGGTGCAAGTAGTCATCCTAGGTGCTCTGATTAATTATTACAAGGGAAAG
TCTGGTGTTGCTGTAATTTTTGTCCTCATTTATGGAATCATCCTGTATGTTTTGATATCT
GGACTCACTCCCATATCTGTTTTGTCAGCATTACAAGCCAGCAACATGCCAGCTATTGTG
ATAGCCAAACTCATCCAGGCAGCCGAAAACATAAAAAACGGACACACCGGTCATTTGTCA
GCTATCACTGTCTACCTGACTTTCATCGGTTCCGCGGCACGCATATTCACCTCGATCCAA
GAGACCGGTGATATGCTTGTAATAGCCACCTACATTGTTTCTACCACTGTGAACGGTGTG
ATTGCATTTCAAATGTACTGGTACTGGACGGCAACTGAAAAGTATATGCAGAAGCCAAAA
AAAGACTAA

InterProScan

PIRSF	MannP-dilichol_defect-1 (IPR016817) - T[1-242] 6.9E-78
PANTHER	MannP-dilichol_defect-1 (IPR016817) - T[2-241] 2.8E-88
Pfam	PQ-loop_rpt (IPR006603) - T[36-95] 3.3E-13 - T[160-201] 4.1E-5
SMART	PQ-loop_rpt (IPR006603) - T[50-81] 1.4E-4 - T[161-192] 0.64

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MPU1_HUMAN	50.655 %	232	8.24E-77