- Clone 'AHC0AAA23YE12' >
- Clone 'cima8112463' >
- Transcript 'Cisavi.CG.ENS81.R25....' >
- Transcript 'KH2012:KH.L37.64.v1....' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S93.g01930.02.t
Possible name(s)
SMYD1; SMYD2; SMYD3
Gene model
Location
S93 [45,096 / 49,285]
Amino acid sequence
Length: 437
>Haaura.CG.MTP2014.S93.g01930.02.p
MLEVFYTQERGRGLKSNAAIRRGTVLMTSEPFIYLLATSQKGIRCDHCFQKQETLLRCSG
CKFMRYCDKNCQRGAWSQHKQECAALKRVSPKIPPDFVILLSRVLWKLENSMEDNKTEDL
VSIMDLESNYDRLTEGQKESLGQFVIILHSYWGLGKLPLQVPDIKAVLELCAKLKNNCFA
ICDEELQSDIGTGVYLSCSLLNHSCVPNCIAVFDQLQLNVRAIRDINEDEELFISYVDQL
APSDERQEEIENIYRFKCECPSCKDKINDSKMLCDFNNKTLCYNSSKITSVKEFLDQLNE
ARKAGNYGQLRDLAAGYIQREVLPINNVYMAKVLDYSMDACIQLQKFEEAFQHGVLALNV
YRSYLNDVHPLTGLQLMKLGKILLWNMKNEEAIQMLLEALKVLQITHSHKGEVMHELRTL
IEQCQVEIRHKSKRKS*
Nucleotide sequence
Length: 1,392
>Haaura.CG.MTP2014.S93.g01930.02.t
ATTACTTACAGATTTAGCGCATTGCGATCTAACGTAGGCAGTTGGTGGTGCTTCAGCCCT
GAGTAAAGCCTAAGATTCAAAATGCTGGAAGTGTTTTATACGCAAGAACGCGGGAGGGGC
CTGAAATCCAATGCTGCTATAAGAAGGGGCACTGTTTTAATGACCTCAGAGCCTTTCATT
TATCTGCTTGCAACCTCACAGAAAGGAATAAGATGTGATCACTGTTTTCAGAAGCAGGAA
ACTTTGCTTCGATGTTCTGGATGTAAATTCATGAGATACTGCGATAAAAATTGCCAGAGA
GGAGCATGGTCACAGCACAAACAAGAGTGTGCTGCATTAAAAAGGGTCTCGCCTAAAATT
CCACCGGATTTTGTCATTTTACTGTCGCGAGTTTTGTGGAAGCTGGAGAATTCTATGGAG
GACAATAAAACAGAAGATCTGGTATCAATAATGGATCTAGAATCAAACTACGACAGACTG
ACCGAAGGACAAAAGGAAAGCTTAGGACAGTTTGTTATCATATTGCATTCGTACTGGGGC
CTTGGAAAATTACCTCTGCAAGTTCCTGATATCAAGGCGGTGTTGGAATTGTGTGCAAAG
TTAAAAAACAATTGCTTTGCAATATGTGATGAGGAACTTCAATCAGACATCGGAACAGGG
GTGTATTTAAGTTGCAGTCTGCTTAATCACAGTTGCGTTCCAAACTGCATTGCGGTATTT
GACCAGTTACAACTGAATGTAAGAGCCATAAGGGATATAAATGAGGATGAAGAACTATTT
ATCTCCTATGTGGACCAGTTAGCACCCAGCGACGAGAGACAAGAGGAAATCGAAAATATC
TATAGGTTCAAGTGCGAGTGTCCTTCTTGCAAAGATAAAATAAATGATAGCAAAATGTTA
TGTGATTTTAACAACAAAACACTGTGCTACAATTCGTCGAAAATTACATCGGTAAAAGAA
TTTTTAGACCAACTGAACGAAGCAAGAAAAGCGGGAAACTACGGACAATTGAGAGATTTA
GCAGCGGGTTATATTCAAAGGGAAGTCCTGCCTATAAATAATGTGTACATGGCAAAGGTA
CTCGATTATTCAATGGATGCGTGCATACAACTTCAAAAATTCGAGGAGGCATTCCAGCAC
GGTGTGTTAGCTCTGAACGTGTACAGATCTTATCTCAATGATGTCCATCCACTAACTGGT
CTTCAGTTGATGAAGCTAGGAAAAATACTACTCTGGAATATGAAAAATGAGGAAGCCATA
CAAATGCTATTAGAGGCACTCAAAGTCCTTCAGATTACGCATAGTCACAAAGGAGAGGTT
ATGCATGAGCTTCGAACGCTCATTGAACAATGTCAAGTCGAGATCAGACACAAAAGTAAA
CGGAAGAGTTAA
| ProSiteProfiles |
SET_dom (IPR001214) - T[1-237] 14.031 |
| SMART |
SET_dom (IPR001214) - T[1-243] 0.0022 |
| Pfam |
SET_dom (IPR001214) - T[11-236] 1.6E-11 |
| ProSitePatterns |
Znf_MYND (IPR002893) - T[45-83] . |
| ProSiteProfiles |
Znf_MYND (IPR002893) - T[45-83] 11.871 |
| Pfam |
Znf_MYND (IPR002893) - T[45-83] 9.2E-10 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[327-402] 8.85E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[357-436] 3.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMYD3_HUMAN | 37.123 % | 276 | 4.71E-89 |
| SMYD1_HUMAN | 28.285 % | 199 | 1.07E-58 |
| SMYD2_HUMAN | 27.586 % | 189 | 1.36E-55 |