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TRANSCRIPT CARD

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  1. Region 'REG00000159' > 
  2. Transcript 'KH2012:KH.S1404.1.v1...' > 
  3. Clone 'cien93863' > 
  4. Transcript 'KH2012:KH.L154.4.v3....' > 
  5. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S94.g01953.01.t

Possible name(s)

USO1

Gene model

Haaura.CG.MTP2014.S94.g01953

Location

S94 [71,458 / 79,594]

Sequences

Amino acid sequence

Length: 1,001

>Haaura.CG.MTP2014.S94.g01953.01.p
SSEEALFLQSSAYKMNYLKSFVKGSEEAPSGAETVARICDRVSSSTLLEDRRDAVRALKS
LSRKFRYEVGTQAMSHLTNVLESDSNDDEIISYALDTLCNLTSTEADGDGESVPQPELTS
AFVDNLIADEKNVAIVLDLIERYDFSVRLAAVRLLTSLLRCQTNQVQQIVLTKPMGIPRL
IDLLTDSREVIRNDALLILIELTRGNSNIQKIIAFESGFETILNIIRNEGLSDGGVVVED
CLLLLLHLLNRNTSNQQFFKEGSLVQQLAPFFEIDSNAVWSAQKVANLHLMIKVIRTLVS
PSNPSNVTSSCQMVMQSCGLLKRLCDMLMATGVPADILTETINAVSEVIRGCATNQALFE
SVYAPCEPPRPAIVVLLMSMVNDKQPFELRCAVLYCFQCFLHGNPSGQTKIVNTLLPSSL
EPQQISAGQLLCGGLFAAADSLSNWCSAVALSHALHKNLEMKQQLLRVQLATSVGNPPIS
LLQQITNIVRQSTSLQTRMGLLILLCSWMSGCPVAVCHFLHDPSAIPFLLSQIGEHGNEL
DLLLHGVCSLLLGICIVDNDGSVPQRTKESLIELIVARVGLERFCDSLACVTKHDLYSKA
FQRSQPVGDSASNMLFDHNFTKLFKNLEDTIVKMVSNLEDVKKEEESKAAIKAHDSIVSE
YKTLIRNQDSELTELRAALGVLEEKFGQSNEQVESSETQIQQLKDQYNLLKVTKGVAMTE
GGDTVSGEIVTTLTVQIDKLKQENTEKSKLLSEKEDIIQQLRNDLNELEVRALQLSSSDE
RQQNDQQLAENTNVPDDSIAANSTRANMPDDSRLQEHRLSQLNIEIENLRAQLLEKDAEI
QRILEERGTKNVTDDVYDALLAEKIAMQTKTHELEARLSESSEENSRLKERISQMSAEVL
SRQNESDALGKEQSESQALTDKLQSQVENVKREQEDLLILLSDQDVKLDNYKKQLRELGQ
EVSEDEDDYQENDEDVEEVPKINSEDVKDAPNGLDNGMAE*

Nucleotide sequence

Length: 3,003

>Haaura.CG.MTP2014.S94.g01953.01.t
AGCTCGGAGGAAGCCTTGTTTCTTCAATCATCGGCTTACAAGATGAATTATTTGAAATCA
TTTGTAAAGGGCAGTGAAGAAGCACCAAGCGGAGCAGAAACGGTTGCTCGTATCTGTGAT
AGAGTTTCTTCGTCGACGCTTTTAGAAGATAGACGAGATGCCGTCAGGGCATTGAAATCT
TTATCAAGGAAATTTCGCTATGAAGTTGGCACACAAGCGATGTCTCATTTGACGAATGTT
CTTGAATCAGATTCCAATGATGATGAAATCATATCCTATGCCCTTGATACTTTGTGCAAT
TTAACTTCTACAGAAGCTGACGGAGATGGTGAATCTGTACCTCAGCCCGAATTGACATCT
GCCTTTGTCGATAATTTAATCGCTGATGAGAAAAACGTCGCCATCGTGCTGGATCTCATT
GAGCGTTACGATTTTTCTGTACGTCTCGCTGCAGTTCGTTTATTAACCTCGTTGTTGAGG
TGCCAAACTAATCAAGTGCAACAGATCGTCCTGACCAAACCTATGGGCATACCTCGTCTC
ATTGATCTTCTGACAGACAGTCGTGAAGTCATCAGGAACGACGCCCTCCTCATTCTCATC
GAACTCACCAGAGGCAATTCCAATATCCAAAAAATAATCGCGTTCGAGAGCGGATTCGAA
ACCATACTCAATATCATACGTAACGAAGGTCTGAGTGATGGAGGCGTGGTTGTAGAAGAC
TGTCTACTACTTTTATTACATCTTCTTAACAGAAACACGTCAAATCAACAGTTTTTCAAG
GAAGGTTCTTTAGTTCAACAGCTGGCACCGTTCTTTGAAATAGATTCAAATGCTGTTTGG
TCTGCACAGAAAGTAGCCAATCTTCATCTAATGATCAAGGTGATCAGAACACTAGTGTCT
CCGTCGAATCCCTCAAATGTAACTTCTTCATGCCAGATGGTGATGCAGAGCTGTGGTCTG
CTGAAAAGGCTCTGCGACATGTTAATGGCCACAGGCGTTCCTGCTGATATTTTGACAGAG
ACAATAAACGCTGTATCTGAAGTCATAAGAGGATGCGCGACCAACCAAGCACTGTTTGAG
TCTGTGTATGCGCCATGTGAACCTCCTCGACCAGCCATTGTTGTTTTGCTCATGTCCATG
GTTAATGACAAGCAACCATTTGAATTACGTTGTGCCGTTCTGTATTGTTTTCAGTGTTTC
CTTCATGGGAATCCAAGCGGTCAAACAAAAATTGTCAATACTCTGCTACCATCCTCTCTG
GAACCACAACAAATTTCAGCCGGTCAACTCCTCTGTGGCGGATTGTTCGCTGCAGCCGAC
TCACTTTCCAACTGGTGTTCTGCAGTGGCACTTTCCCATGCTCTTCACAAGAACTTGGAA
ATGAAACAACAGCTATTGAGAGTACAACTTGCCACAAGTGTCGGCAACCCTCCCATATCT
CTATTGCAACAGATTACAAATATAGTCAGACAGTCCACTAGCCTACAGACCAGAATGGGT
CTCCTGATACTGCTTTGCAGTTGGATGTCCGGATGCCCTGTTGCTGTGTGCCATTTCCTT
CACGATCCGTCTGCCATACCATTTCTATTAAGTCAGATCGGAGAGCATGGCAATGAGCTC
GACCTCCTGCTTCACGGAGTTTGTTCACTACTTCTAGGAATTTGCATTGTTGACAATGAT
GGTTCCGTGCCGCAGCGAACCAAGGAATCTCTCATTGAGCTCATAGTAGCCAGAGTTGGT
CTAGAAAGATTTTGCGATTCGTTGGCCTGCGTCACCAAACACGATCTGTATTCCAAAGCT
TTCCAACGTTCTCAGCCGGTCGGTGACTCTGCAAGCAACATGCTTTTTGATCATAATTTT
ACCAAACTTTTTAAGAATCTGGAAGATACAATAGTAAAAATGGTTTCGAATCTTGAAGAT
GTTAAAAAGGAAGAAGAGTCTAAAGCAGCAATTAAGGCTCACGACTCAATAGTTAGCGAA
TACAAAACGCTAATACGAAATCAGGATTCAGAGCTGACAGAACTTCGTGCCGCACTCGGA
GTATTAGAAGAAAAGTTCGGTCAGTCAAACGAACAAGTTGAATCGAGTGAGACCCAGATC
CAACAATTAAAAGACCAGTATAACCTCTTAAAGGTTACTAAGGGAGTTGCTATGACCGAA
GGAGGAGACACAGTTTCAGGAGAAATTGTCACCACTTTGACTGTCCAAATAGATAAATTG
AAACAAGAGAACACAGAGAAATCAAAGTTACTATCTGAGAAAGAAGATATCATACAGCAA
CTGCGTAACGATCTCAATGAGCTCGAAGTTCGTGCTCTGCAACTGTCCTCATCTGACGAG
CGGCAACAGAATGATCAGCAACTGGCAGAAAACACTAACGTGCCAGACGACTCCATCGCT
GCAAATTCGACTAGGGCAAATATGCCTGACGATTCCCGATTGCAAGAACACAGGCTGTCT
CAATTGAATATCGAAATTGAGAATTTACGAGCACAACTGTTGGAAAAAGATGCAGAAATA
CAACGGATTCTTGAAGAAAGAGGCACAAAGAATGTCACAGATGACGTCTATGACGCTCTA
CTCGCAGAGAAAATTGCAATGCAAACAAAAACACACGAACTCGAGGCGAGATTGTCAGAA
AGTAGCGAAGAAAATTCGAGGCTGAAAGAAAGAATTTCCCAGATGAGTGCTGAGGTTCTG
TCGAGGCAGAATGAGTCGGATGCCCTTGGGAAAGAGCAATCTGAATCTCAAGCCTTGACA
GATAAACTCCAGTCCCAGGTCGAGAACGTGAAGCGGGAGCAGGAGGACCTCCTTATTCTG
CTCTCGGATCAGGATGTTAAACTGGATAACTATAAGAAGCAGTTGAGGGAGCTTGGGCAA
GAGGTGTCAGAGGATGAGGATGATTACCAGGAGAATGATGAAGATGTAGAAGAAGTGCCT
AAAATCAATTCAGAAGATGTGAAAGACGCTCCGAATGGGCTCGATAACGGAATGGCTGAA
TAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[30-639] 4.1E-221
SUPERFAMILY
ARM-type_fold (IPR016024) - T[38-459] 5.76E-25 - T[491-555] 5.76E-25
SMART
Armadillo (IPR000225) - T[59-103] 3.6 - T[164-204] 77.0 - T[308-350] 39.0
ProSiteProfiles
Armadillo (IPR000225) - T[72-107] 10.062
Pfam
Vesicle_Uso1_P115_head (IPR006953) - T[356-633] 1.7E-52
Pfam
Uso1_p115_C (IPR006955) - T[870-978] 1.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
USO1_HUMAN 49.128 % 832 0