- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S94.g01953.02.t
Possible name(s)
USO1
Gene model
Location
S94 [71,458 / 79,594]
Amino acid sequence
Length: 1,098
>Haaura.CG.MTP2014.S94.g01953.02.p
SSEEALFLQSSAYKMNYLKSFVKGSEEAPSGAETVARICDRVSSSTLLEDRRDAVRALKS
LSRKFRYEVGTQAMSHLTNVLESDSNDDEIISYALDTLCNLTSTEADGDGESVPQPELTS
AFVDNLIADEKNVAIVLDLIERYDFSVRLAAVRLLTSLLRCQTNQVQQIVLTKPMGIPRL
IDLLTDSREVIRNDALLILIELTRGNSNIQKIIAFESGFETILNIIRNEGLSDGGVVVED
CLLLLLHLLNRNTSNQQFFKEGSLVQQLAPFFEIDSNAVWSAQKVANLHLMIKVIRTLVS
PSNPSNVTSSCQMVMQSCGLLKRLCDMLMATGVPADILTETINAVSEVIRGCATNQALFE
SVYAPCEPPRPAIVVLLMSMVNDKQPFELRCAVLYCFQCFLHGNPSGQTKIVNTLLPSSL
EPQQISAGQLLCGGLFAAADSLSNWCSAVALSHALHKNLEMKQQLLRVQLATSVGNPPIS
LLQQITNIVRQSTSLQTRMGLLILLCSWMSGCPVAVCHFLHDPSAIPFLLSQIGEHGNEL
DLLLHGVCSLLLGICIVDNDGSVPQRTKESLIELIVARVGLERFCDSLACVTKHDLYSKA
FQRSQPVGDSASNMLFDHNFTKLFKNLEDTIVKMVSNLEDVKKEEESKAAIKAHDSIVSE
YKTLIRNQDSELTELRAALGVLEEKFGQSNEQVESSETQIQQLKDQYNLLKVTKGVAMTE
GGDTVSGEIVTTLTVQIDKLKQENTEKSKLLSEKEDIIQQLRNDLNELEVRALQLSSSDE
RQQNDQQLAENTNVPDDSIAANSTRANMPDDSRLQEHRLSQLNIEIENLRAQLLEKDAEI
QRILEERGTKNVTDDVYDALLAEKIAMQTKTHELEARLSESSEENSRLKERISQMSAEVL
SRQNESDALGKEQSESQALTDKLQSQVENVKREQEDLLILLSDQDVKLDNYKKQLRELGQ
ESQYAHPNFALPFHDPEDLASMMKKRSAMKRIKNWRNLNPSSPSVRGPTSPLGSSGVTVR
HLTSRLIDHAAERPPPKSDEVVVSPIQSPDQIPAWLKMVSEDEDDYQENDEDVEEVPKIN
SEDVKDAPNGLDNGMAE*
Nucleotide sequence
Length: 3,294
>Haaura.CG.MTP2014.S94.g01953.02.t
AGCTCGGAGGAAGCCTTGTTTCTTCAATCATCGGCTTACAAGATGAATTATTTGAAATCA
TTTGTAAAGGGCAGTGAAGAAGCACCAAGCGGAGCAGAAACGGTTGCTCGTATCTGTGAT
AGAGTTTCTTCGTCGACGCTTTTAGAAGATAGACGAGATGCCGTCAGGGCATTGAAATCT
TTATCAAGGAAATTTCGCTATGAAGTTGGCACACAAGCGATGTCTCATTTGACGAATGTT
CTTGAATCAGATTCCAATGATGATGAAATCATATCCTATGCCCTTGATACTTTGTGCAAT
TTAACTTCTACAGAAGCTGACGGAGATGGTGAATCTGTACCTCAGCCCGAATTGACATCT
GCCTTTGTCGATAATTTAATCGCTGATGAGAAAAACGTCGCCATCGTGCTGGATCTCATT
GAGCGTTACGATTTTTCTGTACGTCTCGCTGCAGTTCGTTTATTAACCTCGTTGTTGAGG
TGCCAAACTAATCAAGTGCAACAGATCGTCCTGACCAAACCTATGGGCATACCTCGTCTC
ATTGATCTTCTGACAGACAGTCGTGAAGTCATCAGGAACGACGCCCTCCTCATTCTCATC
GAACTCACCAGAGGCAATTCCAATATCCAAAAAATAATCGCGTTCGAGAGCGGATTCGAA
ACCATACTCAATATCATACGTAACGAAGGTCTGAGTGATGGAGGCGTGGTTGTAGAAGAC
TGTCTACTACTTTTATTACATCTTCTTAACAGAAACACGTCAAATCAACAGTTTTTCAAG
GAAGGTTCTTTAGTTCAACAGCTGGCACCGTTCTTTGAAATAGATTCAAATGCTGTTTGG
TCTGCACAGAAAGTAGCCAATCTTCATCTAATGATCAAGGTGATCAGAACACTAGTGTCT
CCGTCGAATCCCTCAAATGTAACTTCTTCATGCCAGATGGTGATGCAGAGCTGTGGTCTG
CTGAAAAGGCTCTGCGACATGTTAATGGCCACAGGCGTTCCTGCTGATATTTTGACAGAG
ACAATAAACGCTGTATCTGAAGTCATAAGAGGATGCGCGACCAACCAAGCACTGTTTGAG
TCTGTGTATGCGCCATGTGAACCTCCTCGACCAGCCATTGTTGTTTTGCTCATGTCCATG
GTTAATGACAAGCAACCATTTGAATTACGTTGTGCCGTTCTGTATTGTTTTCAGTGTTTC
CTTCATGGGAATCCAAGCGGTCAAACAAAAATTGTCAATACTCTGCTACCATCCTCTCTG
GAACCACAACAAATTTCAGCCGGTCAACTCCTCTGTGGCGGATTGTTCGCTGCAGCCGAC
TCACTTTCCAACTGGTGTTCTGCAGTGGCACTTTCCCATGCTCTTCACAAGAACTTGGAA
ATGAAACAACAGCTATTGAGAGTACAACTTGCCACAAGTGTCGGCAACCCTCCCATATCT
CTATTGCAACAGATTACAAATATAGTCAGACAGTCCACTAGCCTACAGACCAGAATGGGT
CTCCTGATACTGCTTTGCAGTTGGATGTCCGGATGCCCTGTTGCTGTGTGCCATTTCCTT
CACGATCCGTCTGCCATACCATTTCTATTAAGTCAGATCGGAGAGCATGGCAATGAGCTC
GACCTCCTGCTTCACGGAGTTTGTTCACTACTTCTAGGAATTTGCATTGTTGACAATGAT
GGTTCCGTGCCGCAGCGAACCAAGGAATCTCTCATTGAGCTCATAGTAGCCAGAGTTGGT
CTAGAAAGATTTTGCGATTCGTTGGCCTGCGTCACCAAACACGATCTGTATTCCAAAGCT
TTCCAACGTTCTCAGCCGGTCGGTGACTCTGCAAGCAACATGCTTTTTGATCATAATTTT
ACCAAACTTTTTAAGAATCTGGAAGATACAATAGTAAAAATGGTTTCGAATCTTGAAGAT
GTTAAAAAGGAAGAAGAGTCTAAAGCAGCAATTAAGGCTCACGACTCAATAGTTAGCGAA
TACAAAACGCTAATACGAAATCAGGATTCAGAGCTGACAGAACTTCGTGCCGCACTCGGA
GTATTAGAAGAAAAGTTCGGTCAGTCAAACGAACAAGTTGAATCGAGTGAGACCCAGATC
CAACAATTAAAAGACCAGTATAACCTCTTAAAGGTTACTAAGGGAGTTGCTATGACCGAA
GGAGGAGACACAGTTTCAGGAGAAATTGTCACCACTTTGACTGTCCAAATAGATAAATTG
AAACAAGAGAACACAGAGAAATCAAAGTTACTATCTGAGAAAGAAGATATCATACAGCAA
CTGCGTAACGATCTCAATGAGCTCGAAGTTCGTGCTCTGCAACTGTCCTCATCTGACGAG
CGGCAACAGAATGATCAGCAACTGGCAGAAAACACTAACGTGCCAGACGACTCCATCGCT
GCAAATTCGACTAGGGCAAATATGCCTGACGATTCCCGATTGCAAGAACACAGGCTGTCT
CAATTGAATATCGAAATTGAGAATTTACGAGCACAACTGTTGGAAAAAGATGCAGAAATA
CAACGGATTCTTGAAGAAAGAGGCACAAAGAATGTCACAGATGACGTCTATGACGCTCTA
CTCGCAGAGAAAATTGCAATGCAAACAAAAACACACGAACTCGAGGCGAGATTGTCAGAA
AGTAGCGAAGAAAATTCGAGGCTGAAAGAAAGAATTTCCCAGATGAGTGCTGAGGTTCTG
TCGAGGCAGAATGAGTCGGATGCCCTTGGGAAAGAGCAATCTGAATCTCAAGCCTTGACA
GATAAACTCCAGTCCCAGGTCGAGAACGTGAAGCGGGAGCAGGAGGACCTCCTTATTCTG
CTCTCGGATCAGGATGTTAAACTGGATAACTATAAGAAGCAGTTGAGGGAGCTTGGGCAA
GAGAGTCAATACGCTCACCCCAACTTTGCTCTACCGTTCCACGATCCTGAGGACTTGGCG
TCGATGATGAAAAAGCGCAGCGCCATGAAACGAATTAAAAACTGGCGCAACCTAAACCCT
TCTTCACCATCGGTTAGGGGACCCACATCTCCGTTGGGGTCTTCTGGGGTAACAGTGAGG
CATTTAACATCACGCCTAATTGATCACGCCGCAGAAAGGCCGCCTCCAAAGTCGGACGAA
GTCGTTGTCTCTCCCATACAATCTCCCGATCAGATACCGGCATGGCTCAAAATGGTGTCA
GAGGATGAGGATGATTACCAGGAGAATGATGAAGATGTAGAAGAAGTGCCTAAAATCAAT
TCAGAAGATGTGAAAGACGCTCCGAATGGGCTCGATAACGGAATGGCTGAATAA
| Gene3D |
ARM-like (IPR011989) - T[30-639] 5.2E-221 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[38-459] 3.13E-23 - T[491-555] 3.13E-23 |
| SMART |
Armadillo (IPR000225) - T[59-103] 3.6 - T[164-204] 77.0 - T[308-350] 39.0 |
| ProSiteProfiles |
Armadillo (IPR000225) - T[72-107] 10.062 |
| Pfam |
Vesicle_Uso1_P115_head (IPR006953) - T[356-633] 2.0E-52 |
| Pfam |
Uso1_p115_C (IPR006955) - T[870-962] 3.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| USO1_HUMAN | 49.128 % | 827 | 0 |