Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S977.g07270.01.t

Possible name(s)

ARCN1

Gene model

Haaura.CG.MTP2014.S977.g07270

Location

S977 [9,130 / 14,639]

Sequences

Amino acid sequence

Length: 526

>Haaura.CG.MTP2014.S977.g07270.01.p
MTKNGRAIISRQFVEMTRSRIEGLLAAFPKLMNSGSGKQHTFVETESVRYVYQPLEKMYM
LLITTKNSNILEDLETLRLFSRLIPEYCRILDETDIQEHAFELIFAFDEVVALGYRESVN
LAQIRTFTEMDSHEEKVYRAVRKTQEDDAKAAMRRKAKELQQQKRDMMRGGSRGIGGGGY
GGGFGSTKSDMGMTQIISPEPPKPAPAPTRSTGRAMKLGAKSKDIDSFVDKLRSEGEVIT
SSASKKKANDIAKTSVPAALMESVHVRIEERISITANRDGGLQQMQLQGLCTVHITDEKS
GCIQLSVENNDDKGCQIQTHPNVDKKTFQAKGLVGLKNPSKPFPLKQDVGVLKWRLQSTD
ESLMPLAINCWPNENGDGGCDVNIEYELQVDGLELADVCVSIPIPSGVGAPNVAEADGEY
KHDSRKNILEWTLPVIDKTNKNGSMEFSIPGSADDFFPVTVTFHSAKTTYTDIKVTAAEH
VQGGPVKYSSESALLVDKYEIVEPVSTMYYKSVSLYSAIELFLLV*

Nucleotide sequence

Length: 1,680

>Haaura.CG.MTP2014.S977.g07270.01.t
GAAATTATTTTCCTCGACTATTGTGCTGTCGTCAATTTTTTACGGTCGTCTGGAAGCGAT
ATTGCAACTTTTTAAAGATGGGTTCTTCTGGCCGCTGCTGTGATGACCAAAAATGGACGA
GCAATCATATCTCGTCAGTTTGTTGAGATGACACGCTCCCGCATAGAGGGTCTTCTCGCC
GCTTTTCCAAAGCTCATGAACAGCGGTAGTGGCAAGCAGCATACGTTCGTTGAAACAGAG
TCGGTCAGATACGTTTATCAGCCCCTGGAAAAAATGTACATGCTTCTTATAACCACTAAG
AACAGTAATATACTAGAAGATTTGGAAACTCTGCGATTATTTTCAAGATTGATTCCAGAA
TATTGCCGAATCCTGGACGAAACCGACATCCAAGAACATGCATTTGAACTTATTTTTGCA
TTCGATGAAGTCGTTGCTCTCGGATATAGAGAGAGTGTGAACCTGGCCCAAATTCGTACT
TTTACAGAGATGGATTCCCATGAAGAGAAGGTTTACAGGGCTGTTAGGAAAACCCAAGAA
GACGATGCAAAGGCAGCAATGCGTAGAAAGGCGAAAGAATTGCAACAACAGAAGAGAGAT
ATGATGCGTGGTGGTTCGAGAGGAATAGGAGGAGGTGGATACGGCGGTGGATTTGGAAGT
ACAAAGTCAGATATGGGAATGACGCAGATCATTTCACCAGAGCCTCCTAAACCAGCACCT
GCTCCAACAAGGAGTACAGGCCGTGCCATGAAACTCGGAGCCAAATCTAAGGACATTGAT
TCATTCGTCGATAAACTGAGATCAGAAGGAGAAGTGATTACAAGTAGCGCGAGTAAGAAA
AAAGCAAACGACATTGCAAAGACAAGTGTACCTGCAGCACTAATGGAAAGCGTGCATGTG
AGAATTGAAGAGCGCATAAGCATCACTGCCAACAGAGACGGAGGTTTGCAACAAATGCAG
TTGCAGGGTCTTTGCACGGTTCACATCACTGATGAAAAATCCGGATGTATACAACTTTCC
GTTGAAAATAATGATGATAAAGGATGTCAAATACAGACCCATCCAAACGTTGATAAGAAG
ACATTCCAAGCAAAGGGACTTGTCGGACTTAAAAATCCAAGCAAGCCCTTCCCGTTAAAG
CAAGATGTTGGTGTGCTCAAGTGGAGACTGCAAAGCACTGACGAAAGCCTGATGCCACTT
GCTATCAACTGCTGGCCAAATGAAAATGGTGACGGCGGTTGCGACGTCAATATTGAATAT
GAACTACAAGTCGATGGACTTGAACTCGCAGACGTCTGCGTCTCAATCCCTATTCCGTCA
GGTGTTGGGGCTCCGAATGTAGCGGAGGCAGATGGAGAATACAAGCACGATTCAAGGAAA
AATATTCTTGAATGGACCTTGCCGGTGATAGATAAAACAAATAAAAATGGTTCAATGGAG
TTCAGTATACCGGGATCCGCAGATGATTTCTTTCCAGTAACAGTTACTTTTCATTCGGCC
AAAACTACCTACACAGATATTAAGGTTACCGCCGCTGAACATGTGCAAGGTGGTCCGGTT
AAGTATTCCTCGGAATCAGCCCTGCTAGTTGACAAGTACGAAATAGTAGAACCGGTATCC
ACCATGTATTATAAGTCCGTCAGTTTATATTCTGCAATAGAGTTGTTCCTGTTGGTTTAA

InterProScan

PANTHER	Coatomer_dsu (IPR027059) - T[1-502] 2.0E-210
SUPERFAMILY	Longin-like_dom_sf (IPR011012) - T[2-135] 1.01E-28
Pfam	MHD (IPR028565) - T[261-480] 2.7E-31
ProSiteProfiles	MHD (IPR028565) - T[261-502] 31.073
SUPERFAMILY	AP2_Mu_C_sf (IPR036168) - T[262-486] 1.57E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COPD_HUMAN	65.613 %	686	0