Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C11.49.v2....' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S97.g01993.01.t

Possible name(s)

SNF8

Gene model

Haaura.CG.MTP2014.S97.g01993

Location

S97 [7,908 / 9,407]

Sequences

Amino acid sequence

Length: 247

>Haaura.CG.MTP2014.S97.g01993.01.p
MRRRGVGAGAIAKKKLEDAKYKERGNVLAAQQLQQLSKQLESFHSNLEEFAAKHKQEIRK
SPQFRHQFQQMCAAIGVDPLASGKGFWSEMLGVGDFYYELGIQAIEACIATRSRNGGIMT
LHELLQRLLKSRGKYGQDISQEDVITAIKKIKVLGTGFAIIGSGERCMIQSVPGELNMDH
TTVLEQAQKNGGKICCPTLEKALSWKQERSELILVHLLREGMCWVDEQSPDKQLWYWFPA
LFNEAD*

Nucleotide sequence

Length: 741

>Haaura.CG.MTP2014.S97.g01993.01.t
ATGAGACGCCGTGGTGTAGGAGCAGGTGCTATAGCAAAGAAAAAACTTGAAGATGCAAAA
TATAAAGAAAGAGGCAACGTTCTGGCCGCTCAACAGCTGCAACAACTTAGCAAACAGCTA
GAGTCCTTTCACAGTAATTTGGAAGAATTTGCCGCCAAACACAAGCAGGAAATTAGAAAA
AGTCCACAATTCAGACATCAGTTTCAACAAATGTGTGCTGCAATCGGTGTTGACCCGCTA
GCTTCTGGAAAAGGATTCTGGTCTGAAATGCTAGGCGTGGGAGATTTCTATTATGAACTT
GGCATTCAGGCTATAGAGGCTTGTATTGCAACACGATCAAGGAATGGTGGAATAATGACA
TTGCATGAATTACTACAGAGACTTCTCAAGAGCAGAGGAAAATATGGTCAAGACATATCA
CAAGAAGATGTCATAACTGCTATTAAAAAAATAAAGGTGTTAGGTACAGGTTTTGCCATA
ATCGGCAGTGGAGAAAGGTGCATGATACAGTCTGTCCCAGGTGAATTGAACATGGATCAT
ACTACTGTACTTGAGCAGGCCCAAAAGAATGGTGGAAAAATCTGCTGCCCTACCCTGGAA
AAAGCTTTGTCCTGGAAACAGGAAAGATCCGAACTTATACTGGTTCATCTATTACGTGAA
GGAATGTGCTGGGTTGATGAACAGTCACCTGATAAACAGTTGTGGTACTGGTTTCCGGCA
TTGTTTAACGAAGCAGATTGA

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-244] 1.6E-97
PIRSF
ESCRT-2_cplx_Snf8 (IPR016689) - T[2-246] 3.6E-91
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[25-175] 2.45E-48 - T[176-242] 9.52E-12
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[92-172] 2.5E-30 - T[173-246] 1.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 65.164 % 333 2.41E-116