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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L154.4.v1....' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S97.g02005.08.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S97.g02005

Location

S97 [101,666 / 102,879]

Sequences

Amino acid sequence

Length: 338

>Haaura.CG.MTP2014.S97.g02005.08.p
MSDGEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER

Nucleotide sequence

Length: 1,014

>Haaura.CG.MTP2014.S97.g02005.08.t
ATGTCTGACGGAGAAGAAGATCAAACCGCCATTGTCTGCGACAACGGATCAGGATTGGTC
AAATCTGGTTTCGCCGGTGATGATGCACCTCGAGCAGTCTTCCCATCGATCGTTGGTCGC
CCAAGACACCAAGGAGTAATGGTCGGTATGGGACAGAAAGACAGTTATGTGGGTGACGAA
GCTCAAAGCAAAAGAGGAATCTTGACTTTAAAATATCCCATTGAACACGGTATCATCACT
AACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTCCGCGTGGCT
CCAGAAGAACATCCAACTCTTCTCACTGAAGCTCCCCTGAATCCGAAGGCAAACCGAGAG
AAGATGACACAAATTATGTTCGAAACATTTAATGTTCCTGCAATGTATGTGGCAATCCAA
GCTGTCCTCTCACTGTACGCCTCAGGGCGAACTACCGGTATTGTCCTCGATTCTGGTGAC
GGTGTATCACACAACGTTCCAATATACGAAGGTTATGCCCTTCCCCACGCCATAGCACGA
TTGGATTTGGCTGGCCGTGACCTCACCGACTATTTGATGAAGATACTCACTGAGAGAGGA
TACTCTTTCGTCACTACAGCCGAACGTGAAATCGTGCGGGATATCAAGGAGAAACTTTGC
TACGTTGCTCTCGATTTCGAACAAGAAATGGCAACGGCTGCTTCCTCAACGTCGCTGGAA
AAGAGCTACGAACTTCCAGATGGACAAGTTATCACTATTGGCAACGAGCGATTCAGATGC
CCTGAAACGCTCTTTCAACCCTCTTTCATTGGTATGGAATCGGCTGGAATTCACGAAACC
ACATACAATTCAATCATGAAATGCGACATAGATATTCGTAAAGACTTGTACGCCAACAAC
GTCCTTTCCGGCGGTACCACCATGTATCCTGGTATCGCAGATCGTATGCAGAAAGAAATC
ACCGCTCTTGCACCAAGCACTATGAAAATCAAGATCATCGCTCCTCCTGAAAGA

InterProScan

PANTHER
Actin (IPR004000) - T[5-338] 1.2E-236
Pfam
Actin (IPR004000) - T[7-338] 1.8E-121
SMART
Actin (IPR004000) - T[8-338] 1.4E-183
PRINTS
Actin (IPR004000) - T[29-38] 3.6E-58 - T[52-63] 3.6E-58 - T[64-86] 3.6E-58 - T[118-131] 3.6E-58 - T[143-162] 3.6E-58 - T[239-255] 3.6E-58
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 97.305 % 682 0
ACTS_HUMAN 97.006 % 681 0
ACTC_HUMAN 97.305 % 682 0