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TRANSCRIPT CARD

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  1. Clone 'cilv006n15' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S97.g02008.01.t

Possible name(s)

ACTA2; ACTC1; ACTG2

Gene model

Haaura.CG.MTP2014.S97.g02008

Location

S97 [101,654 / 102,516]

Sequences

Amino acid sequence

Length: 194

>Haaura.CG.MTP2014.S97.g02008.01.p
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIARL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLYGQVITIGNERFRCPETLFQPS
FIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTM
KIKIIAPPERKYSV

Nucleotide sequence

Length: 582

>Haaura.CG.MTP2014.S97.g02008.01.t
ATGACACAAATTATGTTCGAAACATTTAATGTTCCTGCAATGTATGTGGCAATCCAAGCT
GTCCTCTCACTGTACGCCTCAGGGCGAACTACCGGTATTGTCCTCGATTCTGGTGACGGT
GTATCACACAACGTTCCAATATACGAAGGTTATGCCCTTCCCCACGCCATAGCACGATTG
GATTTGGCTGGCCGTGACCTCACCGACTATTTGATGAAGATACTCACTGAGAGAGGATAC
TCTTTCGTCACTACAGCCGAACGTGAAATCGTGCGGGATATCAAGGAGAAACTTTATGGA
CAAGTTATCACTATTGGCAACGAGCGATTCAGATGCCCTGAAACGCTCTTTCAACCCTCT
TTCATTGGTATGGAATCGGCTGGAATTCACGAAACCACATACAATTCAATCATGAAATGC
GACATAGATATTCGTAAAGACTTGTACGCCAACAACGTCCTTTCCGGCGGTACCACCATG
TATCCTGGTATCGCAGATCGTATGCAGAAAGAAATCACCGCTCTTGCACCAAGCACTATG
AAAATCAAGATCATCGCTCCTCCTGAAAGAAAGTACTCTGTA

InterProScan

SMART
Actin (IPR004000) - T[1-194] 2.8E-31
PANTHER
Actin (IPR004000) - T[1-98] 2.5E-129 - T[100-194] 2.5E-129
Pfam
Actin (IPR004000) - T[1-97] 5.3E-29 - T[100-194] 1.7E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 86.425 % 380 3.1E-134
ACTC_HUMAN 86.425 % 380 2.87E-134
ACTH_HUMAN 86.425 % 380 3.93E-134