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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S986.g07310.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S986.g07310

Location

S986 [8,437 / 8,773]

Sequences

Amino acid sequence

Length: 112

>Haaura.CG.MTP2014.S986.g07310.01.p
EEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPK

Nucleotide sequence

Length: 336

>Haaura.CG.MTP2014.S986.g07310.01.t
GAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCAGGATTGGTTAAATCTGGTTTT
GCTGGCGATGATGCACCAAGAGCAGTTTTCCCGTCAATTGTCGGTCGTCCAAGACATCAA
GGTGTCATGGTCGGTATGGGACAGAAGGACAGCTACGTAGGAGACGAAGCACAAAGCAAG
CGAGGAATCCTGACTTTGAAATATCCCATTGAACATGGTATCATCACTAACTGGGATGAT
ATGGAAAAGATTTGGCATCACACTTTCTATAATGAACTCCGTGTTGCTCCTGAAGAACAT
CCAACACTTTTGACTGAAGCTCCTTTGAATCCTAAA

InterProScan

PANTHER
Actin (IPR004000) - T[1-112] 1.2E-75
Pfam
Actin (IPR004000) - T[2-112] 1.8E-37
PRINTS
Actin (IPR004000) - T[25-34] 5.5E-24 - T[48-59] 5.5E-24 - T[60-82] 5.5E-24
ProSitePatterns
Actin_CS (IPR004001) - T[52-62] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 95.536 % 234 2.14E-78
ACTS_HUMAN 96.429 % 235 1.13E-78
ACTC_HUMAN 96.429 % 235 1.14E-78