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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...'
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S99.g02032.01.t

Possible name(s)

GPC3; GPC4; GPC5

Location

S99 [4,991 / 21,664]

Sequences

Amino acid sequence

Length: 626

>Haaura.CG.MTP2014.S99.g02032.01.p
EDIDNLLKRTHNSTNDLLKVLLQSTRGDTLAISLTELDRLFRELNFRSSHEDVTKAFERF
GDKLFLAILVGSEEYEPPFEDCVSKQRRDLHPLMNTPSVIAMNLSNALRLARTLHEALLA
GTITVNVTGNIELSKSCKNSLLSMQYCSHCFGLTLLKPCMGLCRNVFRGCFAGITELDRY
WNYYITALSEVTRRMRSEESKFNLEVVLENFENKLSSSISVLLENITALQETVDKRCKQT
RALERSKRTADLQQPELDVRNPRTKHKTEGRRDRHHKKSPRERSLRTKELSKLKEELPPG
NPVPPSSHTAARVLPPHQILYTSPQKRSKETQQHLVESKRPKGSFHTRIKRFIASLNRSV
NFYRHLPDDMCESQAGMAIEVSSDRCWDGSNIVDIYSKDVAPIGFEKQATNPEVKVLKVE
NGVMTAIEKLRYATKILFKSAGTMEVPGILLEAPVFERDDVDANIFSGPGSWPCDDEDDC
PQEGSGAYETDEGREKDFYPGTEVSPSHREEVDIDLLRHQNIHKNSKSRNGVKVLLDRSK
LYNGTINMDMTEEEYEVSSNDRNKKGKNRKKNKKGRQHDTKKMEERSKLDPDGNSAFSTT
RPKFSAIAITVWMAVINMLLGNGQT*

Nucleotide sequence

Length: 1,878

>Haaura.CG.MTP2014.S99.g02032.01.t
GAGGATATTGACAACCTGTTGAAGCGAACGCACAATTCTACAAACGATTTATTGAAAGTA
TTACTGCAGTCAACGAGGGGAGATACACTGGCCATCTCGTTGACTGAACTCGATCGCCTG
TTTCGTGAGCTCAACTTTCGTTCCAGTCATGAGGACGTAACGAAAGCATTTGAAAGGTTC
GGAGACAAACTCTTCCTCGCAATCTTGGTAGGATCGGAAGAATATGAACCTCCCTTTGAG
GATTGCGTTTCAAAGCAAAGACGTGATCTCCATCCGCTTATGAACACGCCATCCGTAATA
GCTATGAATTTATCCAACGCCCTGCGACTTGCACGGACTTTACATGAGGCTTTACTCGCT
GGCACAATAACAGTCAACGTGACTGGAAACATTGAGCTTTCCAAGTCCTGCAAGAATTCT
TTGCTCAGTATGCAATATTGCTCGCATTGTTTTGGCCTTACTCTTCTGAAACCATGTATG
GGTTTATGCCGCAACGTTTTTCGCGGGTGTTTCGCTGGCATAACCGAACTGGATCGTTAC
TGGAATTACTACATAACCGCACTAAGTGAGGTCACACGGCGCATGCGCAGTGAAGAGTCT
AAATTCAACCTGGAAGTTGTTTTGGAAAATTTTGAGAACAAACTGTCTTCGAGCATATCG
GTATTGCTGGAAAACATAACTGCTCTTCAAGAAACGGTGGACAAACGCTGCAAACAGACA
CGAGCACTGGAACGTTCAAAGCGAACCGCCGATCTTCAGCAGCCTGAATTGGACGTGAGA
AATCCTAGAACCAAACACAAAACCGAAGGTAGACGTGATCGTCATCACAAAAAATCACCC
AGGGAGCGTTCCTTACGGACGAAGGAATTATCGAAATTAAAAGAAGAGTTACCGCCAGGC
AATCCAGTACCGCCGTCATCCCACACAGCAGCACGCGTTCTTCCCCCGCATCAAATACTT
TACACATCACCCCAGAAAAGAAGCAAAGAGACACAACAGCATTTGGTCGAGTCGAAAAGA
CCGAAGGGAAGCTTTCACACACGGATTAAGAGATTCATCGCTTCTCTTAACCGGTCCGTC
AATTTCTATCGTCATTTACCGGACGACATGTGCGAATCGCAAGCTGGGATGGCGATCGAA
GTCAGTTCTGACAGATGCTGGGACGGATCGAACATCGTTGATATATATTCAAAGGATGTG
GCACCTATCGGATTTGAAAAACAAGCAACAAATCCGGAAGTAAAGGTGTTAAAGGTCGAA
AACGGAGTCATGACAGCAATCGAAAAGTTACGCTATGCCACTAAGATCTTATTCAAAAGT
GCCGGAACAATGGAAGTTCCTGGAATACTATTAGAGGCTCCTGTTTTCGAGAGAGATGAC
GTTGACGCGAACATTTTTTCTGGACCTGGTAGCTGGCCCTGTGACGATGAAGACGACTGC
CCGCAAGAAGGATCTGGTGCTTATGAAACTGATGAAGGAAGAGAAAAAGATTTTTATCCA
GGAACAGAAGTGTCCCCGTCTCATCGCGAAGAGGTCGACATCGACCTATTGCGTCATCAA
AATATTCACAAAAATTCAAAGTCGCGGAACGGCGTAAAAGTTTTGCTCGACAGATCTAAG
TTATACAACGGAACGATAAATATGGACATGACAGAAGAAGAGTATGAAGTTTCGTCGAAT
GACCGCAACAAAAAGGGCAAAAATCGTAAAAAGAATAAAAAAGGCAGACAGCACGATACC
AAAAAAATGGAAGAAAGGTCCAAGTTGGACCCCGATGGAAATTCAGCCTTTTCCACAACA
AGGCCGAAATTTTCTGCAATAGCAATAACTGTTTGGATGGCAGTAATTAATATGTTGTTG
GGAAATGGTCAAACATAA

InterProScan

Pfam
Glypican (IPR001863) - T[23-268] 2.0E-47 - T[325-502] 7.1E-16
PANTHER
Glypican (IPR001863) - T[39-585] 1.3E-65

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GPC4_HUMAN 29.534 % 105 1.05E-23
GPC5_HUMAN 27.309 % 154 3.39E-40
GPC3_HUMAN 34.706 % 115 5.02E-27