- Transcript 'KH2012:KH.C10.22.v1....' >
- Transcript 'KH2012:KH.S930.2.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Clone 'cima879062' >
- Transcript 'Haaura.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S99.g02039.02.t
Possible name(s)
DKC1; TRUB1
Gene model
Location
S99 [113,512 / 118,255]
Amino acid sequence
Length: 561
>Haaura.CG.MTP2014.S99.g02039.02.p
MVVNGGMDQGHTKKKKRKSDNVTAIGELQEQGDFFIKSEDKQPPKLNTSQWPLLLKNYDR
LNVRTNHYTPLACGCSPLKRDIQEYVRTGFINLDKPANPSSHEVVAWIKRILKVEKTGHS
GTLDPKVTGCLIVCVERATRLVKSQQSAGKEYVCIVRLHDAIENRLKLARAIETLTGALF
QRPPLISAVKRQLRVRTIYESKLLEFDSERNLGVFWISCEAGTYVRTLCVHLGLLLGVGG
QMQELRRVRSGIVSENAGLVTMHDVLDAQWLYEHHKDESYLRRVISPLEKLLVSHKRIIL
KDSAVNAVCYGAKLMLPGLLRYEDGIEINEEIVAITTKGEAICLAIALMTTAVISTCDHG
VVAKIKRVIMERDTYPRKWGLGPKAVMKKNMMKSGLLGKFGKPNENTPKDWMTSYKDYSQ
PETSIPAVEKSLVISADAKIDLQEQVKKEQLATKRKRPASESSSASSEAAVAVISKPPKV
EPVTSDSETKLKKKKKKEKKEKKKLKKDKDALEKSTASSVADETLNTTAASTDASMLQSP
ESKKKKKEKKKKKKKDKEDE*
Nucleotide sequence
Length: 1,683
>Haaura.CG.MTP2014.S99.g02039.02.t
ATGGTGGTCAACGGAGGTATGGATCAAGGCCATACGAAGAAGAAGAAGCGTAAGTCTGAT
AACGTCACTGCAATCGGAGAACTTCAAGAACAAGGTGATTTCTTTATTAAGTCGGAAGAT
AAACAGCCACCTAAGCTCAACACATCGCAATGGCCATTGCTCCTTAAAAACTATGACAGA
CTTAATGTGCGTACAAATCATTACACGCCATTGGCCTGTGGATGTTCTCCTTTGAAGAGA
GACATCCAGGAGTATGTTCGGACGGGATTCATTAACCTCGATAAGCCAGCAAACCCATCA
TCTCATGAAGTCGTTGCATGGATAAAAAGAATATTGAAGGTTGAAAAAACTGGGCACAGT
GGAACTCTGGATCCAAAAGTAACCGGTTGCCTGATTGTGTGTGTCGAACGTGCGACACGT
CTGGTAAAATCCCAGCAGTCAGCAGGTAAGGAATATGTGTGCATTGTACGCCTTCATGAT
GCTATTGAAAATCGACTGAAACTTGCGAGGGCTATTGAAACACTTACCGGAGCATTGTTC
CAGCGTCCTCCCTTAATTTCTGCTGTTAAAAGGCAGTTGCGTGTGCGTACCATTTATGAA
AGCAAGCTATTGGAATTTGATTCTGAAAGGAATTTAGGTGTGTTCTGGATTAGCTGCGAA
GCCGGTACTTACGTCAGAACGTTGTGCGTACATCTCGGTTTGCTGCTTGGTGTCGGGGGT
CAGATGCAAGAACTCAGACGAGTGCGTTCTGGAATCGTTTCAGAAAATGCGGGTCTAGTT
ACAATGCATGATGTGCTGGATGCTCAATGGTTATATGAACACCACAAGGATGAGAGCTAT
CTCAGAAGGGTTATTAGTCCATTGGAGAAGTTGCTTGTTTCACATAAAAGAATAATCCTA
AAAGACAGTGCTGTGAATGCCGTTTGCTACGGTGCTAAATTGATGCTGCCGGGACTTCTG
AGATATGAAGATGGAATCGAGATCAACGAAGAAATTGTAGCGATAACAACCAAGGGTGAA
GCAATATGTTTAGCTATTGCACTAATGACAACTGCGGTGATATCCACATGTGATCACGGA
GTTGTAGCAAAGATTAAAAGAGTCATCATGGAACGGGACACTTACCCCAGAAAATGGGGT
TTGGGACCTAAGGCGGTGATGAAAAAAAATATGATGAAGTCGGGCCTCCTAGGAAAGTTT
GGAAAGCCTAATGAAAATACTCCAAAAGATTGGATGACCTCTTACAAAGATTATTCTCAG
CCAGAAACTTCGATACCGGCTGTTGAAAAATCATTGGTCATCTCTGCCGATGCAAAAATA
GATTTACAAGAGCAGGTGAAGAAAGAACAGCTCGCGACAAAGCGTAAGCGTCCTGCTAGC
GAAAGCTCTTCAGCTTCCTCCGAGGCAGCGGTTGCAGTCATATCTAAGCCTCCTAAAGTA
GAACCAGTTACCTCGGATTCGGAAACTAAACTCAAGAAGAAAAAGAAGAAAGAAAAAAAA
GAAAAGAAGAAATTGAAAAAGGACAAAGATGCTTTAGAAAAATCAACAGCATCTTCAGTA
GCTGATGAAACATTGAACACCACAGCTGCATCGACAGATGCTAGTATGTTGCAGTCTCCT
GAGAGTAAGAAGAAAAAGAAAGAGAAGAAGAAAAAAAAGAAAAAGGACAAAGAAGATGAA
TGA
| PANTHER |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[12-555] 2.1E-243 |
| SMART |
Dyskerin-like (IPR012960) - T[47-105] 2.0E-35 |
| Pfam |
Dyskerin-like (IPR012960) - T[48-105] 5.6E-32 |
| SUPERFAMILY |
PsdUridine_synth_cat_dom_sf (IPR020103) - T[48-293] 2.88E-77 |
| TIGRFAM |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[55-380] 1.2E-165 |
| Pfam |
PsdUridine_synth_N (IPR002501) - T[109-225] 3.5E-20 |
| Pfam |
TruB_C (IPR032819) - T[226-292] 2.5E-20 |
| TIGRFAM |
Uncharacterised_CHP00451 (IPR004521) - T[286-365] 4.8E-7 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[295-376] 1.16E-19 |
| ProSiteProfiles |
PUA (IPR002478) - T[295-370] 17.243 |
| Pfam |
PUA (IPR002478) - T[296-369] 4.4E-17 |
| SMART |
PUA (IPR002478) - T[296-370] 8.3E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DKC1_HUMAN | 72.87 % | 664 | 0 |