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TRANSCRIPT CARD

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  1. Region 'REG00001253' > 
  2. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S99.g02039.04.t

Possible name(s)

DKC1; TRUB1

Gene model

Haaura.CG.MTP2014.S99.g02039

Location

S99 [116,531 / 118,255]

Sequences

Amino acid sequence

Length: 189

>Haaura.CG.MTP2014.S99.g02039.04.p
MVVNGGMDQGHTKKKKRKSDNVTAIGELQEQGDFFIKSEDKQPPKLNTSQWPLLLKNYDR
LNVRTNHYTPLACGCSPLKRDIQEYVRTGFINLDKPANPSSHEVVAWIKRILKVEKTGHS
GTLDPKVTGCLIVCVERATRLVKSQQSAGKEYVCIVRLHDAIENRLKLARVLSHYSYPCP
LEVLSTGL*

Nucleotide sequence

Length: 663

>Haaura.CG.MTP2014.S99.g02039.04.t
ATGGTGGTCAACGGAGGTATGGATCAAGGCCATACGAAGAAGAAGAAGCGTAAGTCTGAT
AACGTCACTGCAATCGGAGAACTTCAAGAACAAGGTGATTTCTTTATTAAGTCGGAAGAT
AAACAGCCACCTAAGCTCAACACATCGCAATGGCCATTGCTCCTTAAAAACTATGACAGA
CTTAATGTGCGTACAAATCATTACACGCCATTGGCCTGTGGATGTTCTCCTTTGAAGAGA
GACATCCAGGAGTATGTTCGGACGGGATTCATTAACCTCGATAAGCCAGCAAACCCATCA
TCTCATGAAGTCGTTGCATGGATAAAAAGAATATTGAAGGTTGAAAAAACTGGGCACAGT
GGAACTCTGGATCCAAAAGTAACCGGTTGCCTGATTGTGTGTGTCGAACGTGCGACACGT
CTGGTAAAATCCCAGCAGTCAGCAGGTAAGGAATATGTGTGCATTGTACGCCTTCATGAT
GCTATTGAAAATCGACTGAAACTTGCGAGAGTTCTTTCTCATTATTCTTATCCTTGTCCT
TTAGAGGTTCTCTCAACTGGACTCTGATATTTATATTTGAGAGCAGTAGAGGTTGACGCC
CGTTTTTCCTCTGATACTGCGTCGCTTGTGAGATACAGAATCTTCGAAAAGCGGGATTTA
TGA

InterProScan

PANTHER
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[12-174] 1.2E-82
SMART
Dyskerin-like (IPR012960) - T[47-105] 2.0E-35
SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[48-171] 3.06E-40
Pfam
Dyskerin-like (IPR012960) - T[48-105] 9.6E-33
Pfam
PsdUridine_synth_N (IPR002501) - T[109-163] 8.7E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DKC1_HUMAN 76.351 % 241 7.08E-78