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TRANSCRIPT CARD

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  1. Clone 'cien45147'
  2. Transcript 'KH2012:KH.C1.29.v1.A...'
  3. Clone 'cilv004l03'
  4. Transcript 'KH2012:KH.C12.648.v1...'
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1013.g13262.02.t

Possible name(s)

RAI1; TCF20

Location

S1013 [40,299 / 42,280]

Sequences

Amino acid sequence

Length: 425

>Phmamm.CG.MTP2014.S1013.g13262.02.p
MMQSSDEASNTEIANADGDTAKLAVVTPFSSLANCGNEKKSEKCTKKRSRQKNRKSASKL
KSNNGSDFGKVSKQNSSQKKNLEKTKQCIETHRVKSKQMNKQKSTQNISSHSSCDGNQIS
MPHHISCLENKGSKQTGRAQNFLETLKQTFPSDVVLCALCGLPGNLFPQIGDLYGPYRPT
YHDVMDRYDAAAKLFDGCGGNLNRKKKDYKNSGCEVCFDNNTCYITARHPSSNHPTHMSD
VATVQNATQSIQNLSPRLHMLQTVDNILLESDKKRHSSTCVKKFHIPGVTRDIRFKSQAD
NVSNKPHVPKINTMVFVEPTVDIEHNNYSTQCSDSSSIQIRHQFDTSQIWVHSMCAVWTP
GVYAIGDQLFGLFQSVRESARRTCYICNRPGASISCYGYRDRTFHHPCALLAKLKMNSDS
LMIYL

Nucleotide sequence

Length: 1,819

>Phmamm.CG.MTP2014.S1013.g13262.02.t
CTAGCAAATCAGCCAAAAACGAAGCGACTGTTATAGATCTTACGCAACCAGGCGTGACTT
CTGCCTGGGAAAGGTGAAAGTTTAGCGGCAACGCACGTTAAAAATCGCTGTTTCGGAAGC
AAAATAAGAAAGTTATGTGCCCAGTCCGCTTTAGAGGCGAGTTTAAACGAAAAATACACG
TAATAAGAGGTGTCGCATTTACTTTTTGTTCAAGATACGTGACGTAATTTTTCTCGAGAA
ATTTTTATTTATTTCTCGAGAATCGAGACTCGATTTTTTCGAGATTTCTCGAGAATTTCT
CGACGAGAATTTCTCGAGAGGGAACTCTAGAATGTATTGTATTGTTCAATTTGTTGTAGA
GAGAGATGCAAATATAACAGCCTACGTAACAAATGCATATACTCTATATTTTTTCTGTGT
AAATACCTTTTTGTAACAAAGACTAATTTTTTAGTTGCAGCTTTCAGGCATGATGCAAAG
TTCCGATGAAGCTAGCAACACTGAGATAGCAAATGCTGATGGTGACACTGCAAAACTTGC
GGTGGTAACACCCTTTTCCTCGTTAGCAAACTGTGGGAATGAAAAGAAATCAGAAAAATG
TACCAAAAAAAGATCAAGGCAAAAAAACAGAAAGTCAGCATCAAAACTGAAAAGCAACAA
TGGATCAGACTTTGGAAAAGTGTCCAAGCAAAATTCTTCTCAAAAAAAGAATCTAGAAAA
AACAAAACAATGCATTGAAACACATCGAGTAAAATCAAAACAAATGAATAAACAGAAATC
CACCCAGAACATCTCATCCCACTCAAGTTGTGATGGTAACCAAATTTCAATGCCACATCA
CATTTCTTGCTTGGAGAATAAAGGGTCAAAGCAGACAGGTCGGGCACAAAACTTTTTGGA
AACACTCAAGCAAACTTTTCCATCTGATGTAGTGTTATGTGCACTGTGTGGGTTACCGGG
AAATTTGTTTCCACAAATTGGAGACTTGTATGGGCCATACAGGCCCACTTACCACGATGT
AATGGATAGATATGATGCAGCCGCCAAATTATTTGATGGTTGTGGTGGAAATTTGAACAG
GAAGAAAAAAGATTACAAAAATTCTGGTTGTGAGGTTTGCTTTGACAACAATACTTGTTA
CATAACAGCGAGGCACCCATCATCTAATCACCCCACACACATGTCAGATGTTGCTACAGT
TCAGAATGCCACACAATCCATCCAGAACTTGTCTCCGCGTCTTCACATGTTGCAAACTGT
TGATAACATCTTACTTGAATCAGATAAAAAGCGACACTCTTCAACATGTGTAAAAAAGTT
CCACATTCCTGGAGTAACCCGAGACATTAGGTTTAAATCACAAGCAGACAATGTTTCCAA
TAAGCCACATGTACCTAAAATTAACACAATGGTGTTTGTTGAACCAACAGTGGATATAGA
ACACAATAATTATTCAACACAGTGCAGTGATAGTTCATCCATTCAAATCCGACACCAGTT
TGACACCAGCCAAATCTGGGTCCATTCCATGTGCGCGGTTTGGACACCCGGCGTTTACGC
CATTGGAGACCAACTGTTTGGTTTGTTTCAATCTGTACGTGAATCAGCAAGGAGAACTTG
TTATATATGCAACCGGCCTGGTGCTTCCATATCATGTTATGGTTACAGAGACAGAACTTT
CCACCATCCATGTGCATTGCTTGCAAAATTAAAAATGAACAGTGACTCGCTCATGATTTA
CTTGTAACTGGAAATTTATCTTTTGTGATTGCAAAATCCCAGAGGTCTTTATTCCTAACT
AACAAATACACGCACTGGT

InterProScan

ProSiteProfiles
EPHD (IPR034732) - T[326-425] 12.535
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[328-424] 8.0E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value