- Transcript 'KH2012:KH.C1.1109.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1024.g13314.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1024 [4,268 / 5,828]
Amino acid sequence
Length: 361
>Phmamm.CG.MTP2014.S1024.g13314.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQ
KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC
F
Nucleotide sequence
Length: 1,086
>Phmamm.CG.MTP2014.S1024.g13314.01.t
ATGTCGGACTCAGAAGAAGATCAGACCGCACTTGTCTGCGACAACGGATCAGGATTGGTC
AAATCCGGATTCGCTGGTGATGACGCACCAAGAGCTGTTTTCCCATCCATTGTTGGACGA
CCAAGACATCAGGGTGTGATGGTTGGTATGGGACAAAAAGACAGCTATGTCGGTGACGAA
GCACAAAGCAAACGTGGTATCCTCACTCTTAAATATCCCATCGAGCACGGAATCATCACC
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCA
CCCGAGGAACATCCAACCCTCCTCACCGAAGCCCCACTTAATCCAAAGGCCAACCGTGAA
AAGATGACTCAAATTATGTTTGAAACCTTCAATGTGCCAGCAATGTATGTTGCCATTCAA
GCCGTGCTTTCCCTGTACGCATCTGGAAGAACTACAGGTATTGTTCTTGATGCCGGTGAC
GGTGTTTCACACAACGTCCCAATCTACGAGGGATATGCGCTCCCACACGCCATCGCGCGT
TTGGATTTGGCCGGACGTGATCTCACAGATTACTTGATGAAGATCTTGACTGAGAGAGGA
TATTCTTTCGTCACAACCGCTGAACGTGAAATCGTTCGTGACATCAAGGAGAAACTTTGC
TACGTCGCTCTTGACTTCGAACAAGAAATGGCAACAGCAGCTTCATCAACCTCTCTTGAG
AAGAGCTATGAGCTTCCCGATGGTCAAGTTATTACCATTGGCATGGAATCTGCTGGTATT
CACGAGACAACATACAACTCCATAATGAAGTGTGACATCGACATCCGAAAGGATCTTTAC
GCCAACAACGTCCTCTCAGGAGGAACCACCATGTATCCTGGTATCGCCGACAGGATGCAG
AAAGAGATCACTGCTCTTGCTCCAAGCACCATGAAGATCAAGATTATCGCTCCACCAGAG
AGGAAATATTCTGTATGGATCGGAGGATCAATCCTTGCATCTTTGTCCACCTTCCAGCAA
ATGTGGATCACCAAACAAGAATATGACGAAGCCGGCCCATCAATTGTTCACCGAAAATGC
TTTTAA
| PANTHER |
Actin (IPR004000) - T[5-360] 3.4E-246 |
| Pfam |
Actin (IPR004000) - T[7-256] 2.5E-86 - T[257-361] 2.9E-45 |
| SMART |
Actin (IPR004000) - T[8-361] 3.7E-210 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.2E-56 - T[52-63] 1.2E-56 - T[64-86] 1.2E-56 - T[118-131] 1.2E-56 - T[143-162] 1.2E-56 - T[239-255] 1.2E-56 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[342-350] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 92.781 % | 718 | 0 |
| ACTS_HUMAN | 92.781 % | 719 | 0 |
| ACTC_HUMAN | 92.593 % | 718 | 0 |