- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1024.g13315.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1024 [8,410 / 9,889]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S1024.g13315.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKCEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Phmamm.CG.MTP2014.S1024.g13315.01.t
ATGTCAGATTCCGAAGAAGATCAAACCGCACTTGTCTGCGACAACGGATCAGGATTGGTC
AAATCCGGATTCGCTGGTGATGACGCACCAAGAGCTGTTTTCCCATCCATTGTTGGACGA
CCAAGACATCAGGGTGTGATGGTCGGTATGGGACAAAAAGACAGCTATGTCGGTGACGAA
GCACAAAGCAAACGTGGTATCCTCACTCTCAAATATCCCATCGAGCACGGAATCATCACC
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCA
CCCGAGGAACATCCAACCCTCCTCACCGAAGCCCCACTTAACCCAAAGGCCAACCGTGAA
AAGATGACTCAAATTATGTTTGAAACCTTCAATGTGCCAGCAATGTATGTTGCCATTCAA
GCAGTGCTTTCCTTGTACGCATCTGGAAGAACTACAGGAATTGTTCTTGATGCCGGTGAC
GGTGTTTCACACAACGTACCAATCTACGAGGGGTATGCGCTCCCACACGCCATCGCGCGT
TTGGATTTGGCCGGACGTGATCTCACAGATTACTTGATGAAGATTTTGACTGAGAGAGGA
TATTCTTTCGTCACAACCGCGGAGCGTGAAATCGTTCGTGACATCAAGGAGAAACTCTGC
TACGTCGCTCTTGACTTCGAACAAGAGATGGCAACCGCAGCCTCATCAACCTCTCTTGAG
AAGAGCTACGAACTCCCCGATGGTCAAGTTATCACCATTGGTAACGAGAGATTCCGTTGC
CCAGAAACACTTTTCCAGCCATCATTTATTGGTATGGAATCTGCTGGTATTCACGAGACA
ACATACAACTCCATCATGAAGTGTGACATCGACATCCGTAAAGATCTTTACGCCAACAAC
GTCCTCTCTGGAGGAACCACCATGTATCCTGGTATCGCTGACAGGATGCAGAAAGAGATC
ACTGCTCTTGCTCCAAGCACCATGAAGATCAAGATCATCGCTCCACCAGAGAGGAAATAC
TCTGTTTGGATCGGAGGATCAATCCTTGCATCTTTGTCCACCTTCCAACAAATGTGGATC
ACCAAATGTGAATATGACGAAGCCGGTCCATCCATTGTTCACCGAAAATGCTTTTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 1.1E-265 |
| Pfam |
Actin (IPR004000) - T[7-378] 3.7E-146 |
| SMART |
Actin (IPR004000) - T[8-378] 7.0E-231 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.8E-57 - T[52-63] 1.8E-57 - T[64-86] 1.8E-57 - T[118-131] 1.8E-57 - T[143-162] 1.8E-57 - T[239-255] 1.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 763 | 0 |
| ACTS_HUMAN | 97.059 % | 763 | 0 |
| ACTC_HUMAN | 96.825 % | 763 | 0 |