- Transcript 'KH2012:KH.S595.1.v1....' >
- Transcript 'KH2012:KH.C1.570.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1024.g13316.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1024 [11,213 / 12,719]
Amino acid sequence
Length: 137
>Phmamm.CG.MTP2014.S1024.g13316.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAIKL
Nucleotide sequence
Length: 414
>Phmamm.CG.MTP2014.S1024.g13316.01.t
ATGTCGGACTCAGAAGAAGATCAGACCGCACTTGTCTGCGACAACGGATCAGGATTGGTC
AAATCCGGATTCGCTGGTGATGACGCACCAAGAGCTGTTTTCCCATCTATTGTTGGACGA
CCCAGACATCAGGGTGTGATGGTCGGTATGGGACAAAAAGACAGCTATGTCGGTGACGAA
GCGCAAAGCAAACGTGGTATCCTCACTCTCAAATATCCCATCGAGCACGGAATCATCACC
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCA
CCCGAGGAACATCCAACCCTCCTCACCGAAGCCCCACTTAACCCAAAGGCCAACCGTGAA
AAGATGACTCAAATTATGTTTGAAACCTTCAATGTGCCAGCAATCAAATTGTGA
| PANTHER |
Actin (IPR004000) - T[4-135] 4.8E-90 |
| Pfam |
Actin (IPR004000) - T[7-135] 1.0E-47 |
| SMART |
Actin (IPR004000) - T[8-137] 1.3E-4 |
| PRINTS |
Actin (IPR004000) - T[29-38] 8.5E-33 - T[52-63] 8.5E-33 - T[64-86] 8.5E-33 - T[118-131] 8.5E-33 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.183 % | 275 | 1.11E-93 |
| ACTS_HUMAN | 96.183 % | 274 | 2.13E-93 |
| ACTC_HUMAN | 95.556 % | 275 | 1.27E-93 |