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TRANSCRIPT CARD

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  1. Clone 'cilv024g13' > 
  2. EST 'FF743231.1' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1027.g13339.02.t

Possible name(s)

AP3B2; AP3D1; COPB1

Gene model

Phmamm.CG.MTP2014.S1027.g13339

Location

S1027 [42,145 / 51,747]

Sequences

Amino acid sequence

Length: 664

>Phmamm.CG.MTP2014.S1027.g13339.02.p
LIYSPSVTDSEPVNEAKLKNDIEHGDIRIKTEALKKVILMTLNGEKLQGLLMTIIKYLLP
SDDHTVKKLLLIFWEIWPKTDQQGKLRPEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLR
QPELIEPLMPAIRTCLEHRHSYVRRNAVLAIYTIYRKFDQLIPDAPELIHDFLEGEKDAS
CKRNAFMMLIHADQERALDYLSTCIDQVNTFNDILQLVIVELVYKVCNANPNERSRFIRC
IYNLLQSTSQAVRYEAAGTLVTLSNAPTAIRAAAQCYIELIVKEADNNVKLIVLDRLIDL
KDHPLHEKVLQEMVMDILRALASPDLEVRRKTLDLALDLVTSRNVEDFVKFMEKEITKSA
NIQGHDNTDKYRQMLVKRMHLCAVKFPDTAAMIIPVLMEFLGDSEELAACDVLLFVREAV
HRYDAHKGLILDKLLEVFSTIRAAKIMRGVLWILGEYCDGTSRILKFVTEVRKSVGDLPI
VEHELKLAAGEADENQDSEEKTAQSAAARRVTEMGTYVTQSAFSVGSKSSGGKGGDNTKR
PPLRQFFMDGDFSLAGSLSTALTKQALRFMTNCNDPRKQNSFAAQCMLILSSVLHLGKSS
LPKKPISDDEVDRLASCLKVLSERQQVMSDIFTSKCRSSLSTLLEIRAAEEIIQRKAAEK
NKSA

Nucleotide sequence

Length: 1,995

>Phmamm.CG.MTP2014.S1027.g13339.02.t
CGCTGATCTACAGTCCATCCGTTACCGACTCTGAGCCTGTTAACGAGGCAAAGTTGAAAA
ATGACATCGAGCATGGTGATATCAGAATCAAGACTGAAGCACTAAAGAAGGTCATACTTA
TGACCTTGAACGGGGAGAAGTTACAAGGTTTGTTAATGACAATCATTAAATATCTTCTCC
CATCCGATGATCACACAGTCAAGAAACTACTTCTCATATTTTGGGAGATTTGGCCAAAAA
CTGACCAACAAGGAAAACTTAGACCTGAGATGATCTTGGTCTGTGATGCTTACAGAAAGG
ATTTGCAACATCCAAATGAGTTTATTCGTGGCTCCACCCTCAGATTTCTATGTAAGCTTC
GCCAGCCAGAGTTGATTGAACCGCTCATGCCGGCGATCAGAACGTGTCTGGAACATCGCC
ACAGTTATGTAAGGAGAAACGCTGTTCTGGCAATCTACACCATTTACAGGAAATTTGACC
AGCTGATTCCTGATGCTCCTGAGTTGATCCATGATTTCTTGGAGGGAGAGAAAGATGCTT
CTTGCAAGAGAAATGCTTTCATGATGTTGATTCACGCAGACCAGGAACGGGCTTTGGATT
ACCTTAGTACTTGTATTGACCAGGTGAACACCTTCAATGACATCCTACAGCTTGTGATAG
TGGAGCTGGTGTACAAAGTTTGCAATGCCAATCCTAACGAAAGATCTAGGTTTATCAGAT
GCATCTATAATCTGCTGCAATCTACAAGCCAAGCTGTTCGATACGAAGCTGCCGGAACGC
TTGTCACCTTATCCAATGCCCCAACTGCTATAAGAGCTGCAGCACAGTGCTATATTGAGT
TGATTGTTAAGGAGGCCGACAATAATGTGAAGTTGATTGTTCTTGATCGATTGATTGACC
TTAAAGATCATCCACTACATGAAAAAGTTTTGCAGGAAATGGTGATGGATATTTTGAGAG
CGCTCGCTTCACCTGACCTTGAAGTTCGGCGCAAAACTCTCGACCTTGCACTTGACCTTG
TAACCTCAAGAAATGTCGAAGATTTTGTGAAATTTATGGAGAAGGAGATCACCAAATCAG
CAAATATCCAGGGTCACGACAACACTGACAAATACCGACAGATGTTGGTGAAACGGATGC
ATTTGTGTGCTGTTAAGTTCCCCGACACAGCTGCGATGATCATTCCAGTGCTCATGGAGT
TTTTGGGTGACAGCGAGGAATTGGCAGCTTGTGACGTTTTGTTGTTCGTTCGTGAAGCTG
TCCACAGATACGACGCACACAAGGGCCTCATTCTAGACAAACTGTTGGAAGTGTTTTCAA
CCATTCGCGCTGCAAAGATAATGCGCGGTGTGTTGTGGATTTTGGGTGAATACTGCGACG
GAACTTCGAGGATTCTCAAATTTGTAACTGAAGTTCGCAAGTCTGTGGGGGATCTCCCTA
TCGTGGAACACGAGCTGAAGTTGGCTGCCGGGGAAGCTGACGAAAATCAGGATAGTGAGG
AAAAGACAGCTCAGTCTGCAGCTGCTCGTCGTGTTACTGAGATGGGAACTTACGTCACCC
AATCAGCTTTCAGCGTTGGGAGTAAATCTTCCGGAGGAAAAGGAGGCGATAACACAAAAC
GTCCACCTCTTCGTCAATTCTTCATGGATGGGGACTTCTCACTTGCCGGTTCCCTTTCCA
CTGCTTTGACCAAACAAGCTCTCAGGTTCATGACAAACTGCAATGATCCACGAAAACAAA
ATTCATTTGCAGCACAGTGCATGCTCATTCTATCGAGCGTTCTACATCTTGGCAAATCTT
CACTTCCCAAGAAACCAATCAGTGATGATGAGGTCGACCGACTTGCCTCGTGCCTGAAGG
TTTTGTCGGAGCGCCAGCAAGTAATGTCTGACATTTTCACATCAAAATGTCGTAGTTCGC
TTTCCACTTTGCTTGAGATTCGAGCTGCTGAGGAAATTATTCAGAGAAAAGCTGCAGAGA
AAAACAAAAGCGCTC

InterProScan

Gene3D
ARM-like (IPR011989) - T[7-523] 2.4E-94
PANTHER
COPB1 (IPR016460) - T[9-661] 1.1E-265
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[14-492] 2.1E-111
SUPERFAMILY
ARM-type_fold (IPR016024) - T[16-475] 1.73E-77

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COPB_HUMAN 67.381 % 907 0