- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S102.g03221.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S102 [151,179 / 153,313]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S102.g03221.01.p
MSDEDEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMASAASSSALE
KSYELPDGQVITIGNERFRCPETMFQPSFIGMESSGVHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Phmamm.CG.MTP2014.S102.g03221.01.t
ATGTCGGACGAAGACGAAGAACAAACCGCACTGGTATGCGACAACGGATCCGGATTGGTA
AAAGCCGGTTTTGCAGGAGATGACGCGCCCAGAGCCGTCTTTCCATCCATCGTCGGTCGC
CCGAGACATCAGGGCGTCATGGTGGGTATGGGTCAAAAAGACAGCTACGTCGGTGACGAG
GCTCAAAGCAAGAGAGGTATCTTGACTCTCAAATACCCGATTGAGCACGGTATCATCACT
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTTGCA
CCAGAGGAACATCCCGTGCTGCTCACTGAAGCCCCACTTAACCCTAAGGCTAACCGTGAA
AAGATGACCCAGATCATGTTCGAGACCTTCAACGTGCCAGCCATGTACGTCGCCATCCAG
GCTGTGCTTTCACTTTATGCCTCCGGACGTACCACTGGTATCGTCCTTGACTCTGGTGAC
GGTGTTTCACACAACGTGCCAATCTACGAGGGTTACGCGCTCCCTCACGCCATCATGCGT
TTGGATTTGGCTGGTCGCGATCTTACCGATTACCTGATGAAGATCCTCACTGAAAGAGGC
TACTCTTTCGTCACCACCGCCGAGCGTGAAATCGTGCGTGACATCAAGGAGAAGCTGTGC
TACGTTGCCCTTGACTTCGAGCAAGAGATGGCATCCGCAGCATCCAGCAGTGCACTCGAG
AAGAGCTACGAACTTCCCGATGGACAAGTGATCACCATTGGAAACGAACGATTCCGTTGC
CCAGAGACAATGTTCCAACCATCCTTCATCGGTATGGAATCATCTGGAGTCCACGAGACA
ACATACAACTCCATCATGAAGTGCGACATCGACATCCGTAAGGATCTTTACGCCAACAAC
GTCCTCTCAGGAGGAACCACCATGTACCCTGGTATCGCCGACAGGATGCAGAAAGAGATC
ACTGCTCTTGCTCCCAGCACCATGAAGATCAAGATCATTGCTCCTCCAGAGAGGAAGTAC
TCCGTCTGGATTGGAGGCTCCATCCTTGCATCTCTCTCCACCTTCCAGCAGATGTGGATC
ACAAAACAAGAGTACGATGAAGCTGGTCCTTCCATCGTCCACAGGAAGTGCTTCTAA
| PANTHER |
Actin (IPR004000) - T[1-377] 4.6E-267 |
| Pfam |
Actin (IPR004000) - T[6-378] 7.1E-149 |
| SMART |
Actin (IPR004000) - T[8-378] 5.1E-238 |
| PRINTS |
Actin (IPR004000) - T[29-38] 6.7E-58 - T[52-63] 6.7E-58 - T[64-86] 6.7E-58 - T[118-131] 6.7E-58 - T[143-162] 6.7E-58 - T[239-255] 6.7E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.267 % | 764 | 0 |
| ACTS_HUMAN | 96.825 % | 769 | 0 |
| ACTC_HUMAN | 97.067 % | 770 | 0 |