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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S4...' > 
  4. Molecular Tool 'En>Dmbx (Stolfi 2011)' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S104.g03263.01.t

Possible name(s)

Phmamm.CG.MTP2014.S104.g03263

Gene model

Phmamm.CG.MTP2014.S104.g03263

Location

S104 [7,132 / 7,794]

Sequences

Amino acid sequence

Length: 112

>Phmamm.CG.MTP2014.S104.g03263.01.p
VKAPKSISSRAIRYEPFYHQQKASRVLARSPMENDSNEKISKSNEREELRFLYGKLRDII
PSCQSKPTTSVDIVLGAVDYIRDLHLMLEDRLLASGKTNSDLEMLRNLCGPE

Nucleotide sequence

Length: 338

>Phmamm.CG.MTP2014.S104.g03263.01.t
GTCAAGGCACCAAAGTCCATTTCATCTCGTGCAATAAGGTATGAACCTTTTTATCACCAG
CAAAAAGCGAGTAGGGTTTTGGCAAGATCACCGATGGAAAATGATTCAAATGAAAAGATT
TCCAAATCAAACGAAAGAGAAGAATTAAGGTTCTTGTACGGCAAACTCCGCGACATCATA
CCTTCGTGTCAGAGCAAACCCACGACAAGTGTAGACATCGTACTGGGAGCGGTCGATTAC
ATTCGTGACCTCCATTTAATGCTTGAAGATAGGTTGTTAGCCTCGGGAAAAACAAACAGC
GACCTTGAAATGTTGCGCAATCTCTGTGGGCCAGAAAG

InterProScan

ProSiteProfiles
bHLH_dom (IPR011598) - T[33-84] 8.918
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[42-101] 4.7E-7
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[46-91] 5.1E-7
Pfam
bHLH_dom (IPR011598) - T[49-85] 1.1E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value