Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S105.g03305.01.t

Possible name(s)

AEBP2; GLI1; GLI3

Gene model

Phmamm.CG.MTP2014.S105.g03305

Location

S105 [162,314 / 169,033]

Sequences

Amino acid sequence

Length: 450

>Phmamm.CG.MTP2014.S105.g03305.01.p
GRDAILKLGFEHRFQDQDFLRTVIFELHEIKMSEILSRKARCREIDRVTLPRKRFQRKRL
HSTEKGYIKDRQELELPVFTTNTSTSSDTTNYAPIGQNTSLVTTATSPPVVTTATAVVPG
RMCLNPYQQSVRPALCKNSDVEPTDQRNYHCSQLAPLVMPKHDNTSDEEMIADSPDSGFE
STTPSGSSLVDFDENSSKSDSFDELLKESISRTPSVNSDISEDRLCLIPPPKAEPTPTKK
VQKNICLWEGCLQQFPTNRDLHLHLTTEHVNSTVTRFCCMWSECKVYQKPTRNLSCLQQH
IRFHTGVKRFQCWLEGCDASFSSQQGLARHVPSHFTDCNLPKAKLSSHNERRYLVKRRRI
KDKRKALANVHDFIDQRTVDTLLTSLVQREKVTSSDTTSQVTCKRRNFDGSSWFLADPLF
TWSKVEQENNGGKLFFGKPLPRCRKRKANY

Nucleotide sequence

Length: 1,412

>Phmamm.CG.MTP2014.S105.g03305.01.t
CGGGCGCGATGCGATATTAAAGCTTGGCTTCGAGCACAGATTTCAAGATCAAGATTTTTT
GCGGACTGTGATTTTTGAGTTGCATGAGATTAAAATGTCTGAGATTTTGTCAAGAAAGGC
GAGATGCAGAGAGATTGACCGTGTAACGTTGCCACGGAAACGGTTCCAAAGAAAGAGGTT
ACACAGTACAGAGAAGGGATACATAAAGGACAGACAAGAGCTGGAACTTCCGGTGTTCAC
AACCAACACCTCTACCTCATCCGACACCACAAACTATGCCCCCATCGGTCAGAATACCTC
TCTTGTCACCACGGCAACCTCTCCTCCAGTGGTCACCACGGCAACAGCGGTGGTACCTGG
TCGCATGTGCCTAAACCCGTACCAGCAATCTGTGAGACCTGCGCTATGCAAAAATTCCGA
CGTCGAGCCAACCGACCAAAGGAACTACCACTGCTCACAACTTGCTCCCCTTGTGATGCC
AAAACACGATAATACAAGCGACGAAGAAATGATCGCTGACAGTCCTGACTCTGGTTTCGA
ATCCACGACACCCAGTGGAAGTTCACTTGTTGATTTTGATGAAAACTCGTCAAAGTCCGA
TAGTTTTGATGAATTGTTAAAAGAATCCATATCTCGAACACCGTCTGTGAATTCGGATAT
AAGTGAGGACAGATTATGTTTGATCCCACCACCAAAAGCTGAGCCAACTCCTACTAAAAA
AGTGCAAAAGAACATTTGTCTATGGGAGGGATGTCTACAACAATTTCCAACAAATCGTGA
TCTACATTTACATTTGACCACAGAACATGTTAATTCAACAGTTACCAGGTTTTGCTGCAT
GTGGTCGGAATGCAAAGTCTACCAGAAGCCGACGAGAAACTTGTCGTGTCTGCAGCAGCA
TATTCGCTTTCACACCGGAGTCAAGAGGTTTCAGTGTTGGCTTGAGGGTTGTGACGCGAG
TTTCAGTTCTCAACAAGGACTCGCTCGTCACGTGCCGTCACACTTCACTGATTGCAACCT
TCCCAAAGCGAAACTTTCATCCCACAATGAACGGCGATACCTTGTAAAGCGCAGAAGAAT
TAAGGACAAAAGAAAGGCTTTAGCCAACGTCCACGACTTCATTGACCAAAGAACTGTCGA
TACGCTTCTGACGTCACTAGTACAGCGCGAGAAAGTGACGTCATCAGATACTACGTCACA
GGTGACTTGCAAACGACGAAATTTCGACGGCAGCTCGTGGTTTCTCGCTGACCCACTTTT
TACGTGGAGTAAAGTCGAGCAGGAAAACAACGGTGGGAAACTTTTCTTCGGAAAACCGCT
TCCAAGATGCAGAAAACGGAAAGCGAATTATTGAGCCTCCGATGATTCTCTGGTGCCACC
CAGCGACGATTTTGTTGTTTGCAACGTACACC

InterProScan

SMART	Znf_C2H2_type (IPR013087) - T[244-269] 5.4 - T[277-304] 44.0 - T[310-334] 0.068
SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[295-335] 3.58E-9
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[312-334] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AEBP2_HUMAN	39.355 %	105	2.47E-24