- Transcript 'Cisavi.CG.ENS81.R2.2...' >
- Transcript 'KH2012:KH.C1.1064.v1...' >
- Transcript 'Boleac.CG.SB_v3.S81....' >
- Transcript 'Cisavi.CG.ENS81.R91....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S106.g03321.01.t
Possible name(s)
NPC1; PTCH1; PTCH2
Gene model
Location
S106 [59,487 / 80,735]
Amino acid sequence
Length: 1,886
>Phmamm.CG.MTP2014.S106.g03321.01.p
MEGNQTRAQNADVSLTESTHAVGNPLHDGNTSKQNIRMDEVSSEASNITPQSRNQSGAVR
VGDVTAHADGISGASTNQSKEVRCLSIRDVSAHLGDDTERPVIKTSSSPEHSRDKEKDQL
YLASFSSSCDSNWRLLNSSCDSTQSNSNTASSDTTKKLPVLKPRSPPISQISSTGSRRLS
NKRKSRSISSLDLSVPKDLSKMTKDETKETEDNRSAASSERSSRHENFELGDMPSADQPD
IGKNSSNGYDLVEDPWVRAPSVSNTSKVRFATARLSTSERSGGVGQQISSTPILPERQSS
DEGEIYSGLPQSRTESQEELDRISQQRRNTNSPEPCHEQQQANQNHDRIRNDLDLLSRPS
WCDAKFALSRVQQGKAEGNQYALKLRAFIHRILFKLGCFIQRNAFTVLFVGLILLTACCI
GLKQAHLETDIEKLWVETNGQLQAELDYGRRQSQSEGQTSESTYNAQLLMQTGSGAATVE
ALKYHLKAAMAATEVSVYMYNQTWSFEDVCYKHSLATTEEGSIFATILDKLLPCLIIGPL
DCFWEGSKILGPKVPLKTIDGIPDITWKTLNPLEFVDLMIDTTGGLSSFTKELRSYRDLM
VQGGITTGYVDRWCLDPNDPECPETAPNFHSKEPPNVVEILNKSCTGFATKLMRWPLDLI
VGGIERNASGHLTSAQGLQTLFNLMGIGNMFQFHDNSFKTRDIDWTKETAKNVLYTWQRK
YVKKIYELQQPENATDEQTLNAFSIATAEDILAKFSNIPLIRVLGGYLLMMGYACLSLMR
TRASRSQGAVGLIGVVLVTLSVAAGLGICTVIGISFNAASTQVLPFLMLGLGVDDMFLMA
HHFGEIAVLSYIPFQERVGECLKRVGVSVVLTSIAILSGFLFSLIIPMPALRAFGYQASI
VTIFNLVSVLVIFPSILSLDLNRRKNNRLDILFCFESSTTNEVIDLSEENNQQRAVNNHG
CNQCHRHNGPLPVDNNHCGTTITMHHTIQAYSNESYVTVLGPAAAGATFHDASGPGRRPG
DMDPTYDLTRTRSPPPQYTPKDQSPPQRPKVAFMDSNGGPPTAERTYDRPIRSTITPASS
VRTLRTNGSNPPTNLTTPMESVRSSTHSLVPKRRRSSSFLCCPRNSKRCGSLYAKLAVLP
SLTLNQLGERYYAPFLMRKPSRIFVLALFGALLGASIYGCTQVKDGLDLGDVLPRGTREH
QAIVAQTTYFSFYPMYIITKEFDYARQQRNMYRIHEQVGNISYVMKQPDGTVMKFWLHYF
REYLEGLQASFDADWQVGKVNASTWSSDVSDKTILAFKLLVQTGRVEDPTDTARIGCTPI
GSKCSRPNRVRLVSDDGIINEDAFYNYLSVWFTDDPLAYAAAQASIYPTPKTFQSSRYDL
NMIIPPSSGLTYSQIPFYLNGMRENEDFVNVIRSVRHICETMAANTELDTYPSGYPFTFW
QQYIDLRFWLFVSLGAVIGAVFLVLSLVLFNPWAAGIMALFLAMIAAELLGFMGWAGVKL
SAVPAVILVAAIGLGVEFTVHITFAYITSCGTREERVARSIGHMLGPVVDGSISTLLGVV
MLAGSEFDFIITYFFQVLAFLILLGVLNGLILLPVVLSLIGPPAEIIPVGGGARLKTPTP
PPSPPGELACNCRQCSCQQNHSANTNHNNNNRCQCMRCSQHRGRGGRYGQPTSRDDLQVH
RRYQTRHDAHVYSQPATENYAGRWRYPDAHYDSRVDNARFVRTDDVPGRSQQYHPHSIPP
INEEETSQVYMRPDYVMYSNGRKPPHTQDIHCENLQTRSDFHPIPPAAEVPRNNGPNVRQ
RGAGDRRQHIATLSSSLTVNLHTSGRPKVVSFVEPGGPPPDVIHPNYVWQKANYDDTPAP
LEHGRMPNRHFDISALNGVSGNIGGT
Nucleotide sequence
Length: 6,924
>Phmamm.CG.MTP2014.S106.g03321.01.t
GAATGGCCGTTTAAAGCAAACTGCTTTTGGTAAATTAGCGGTTTCGCGACGGTTGAGTAG
TAATTCCCTAGTCGTGTAAAAGCGGTCGCGTTGCTTCAAGCCCCTAATAACCCTGTCGTA
CAGGTACTCTGGCTGCCTATCAATCAAGTTACGTCGTGACCGAATGGTCGGTTTGTTTTT
AGATACTTTAGGGCGTCCGTGTGCAAGCCTGTGTCTTTGCACTTCATGTTAACAAGTGTG
CTGGCTGGGGTCTGATATCGACCGATGCCTGTTACCTTATAATGAAAACTACACCCTCAG
TGCACAACTGTCAACCACGTGCTCTTTCGCTGCAATTATGGTATAACTACGCGGAGCGAT
GGAAGGGAATCAAACACGTGCTCAAAATGCTGATGTCAGCTTAACCGAGAGCACACACGC
AGTGGGCAATCCCCTGCATGACGGAAATACCAGCAAACAGAACATTCGAATGGACGAAGT
GTCAAGCGAAGCTAGTAACATCACGCCACAATCAAGGAACCAATCGGGAGCAGTTCGAGT
TGGTGACGTCACAGCACATGCGGATGGCATTTCCGGAGCTTCGACCAATCAATCAAAGGA
AGTCAGATGTTTGTCTATTCGTGATGTGAGCGCACATTTAGGTGACGATACTGAGCGCCC
AGTCATTAAAACTTCCTCGTCGCCAGAGCATTCACGCGACAAGGAAAAAGATCAGTTATA
TTTGGCCAGCTTTTCATCGTCTTGCGATTCAAATTGGAGATTACTGAACAGTTCTTGTGA
TTCGACACAGTCTAATTCGAATACAGCTAGTTCAGATACGACGAAGAAATTACCTGTTTT
GAAACCAAGAAGTCCCCCAATAAGTCAAATCAGTAGTACAGGCAGTAGAAGGCTTTCTAA
CAAACGTAAATCGCGATCGATTTCGTCTTTGGACTTGTCAGTGCCGAAAGATCTGTCGAA
GATGACAAAAGACGAAACGAAAGAGACTGAGGACAATAGAAGCGCTGCCAGTTCGGAACG
ATCATCGAGACATGAGAATTTCGAACTTGGCGACATGCCGTCGGCCGATCAACCCGACAT
CGGCAAAAATTCTTCAAACGGTTACGACCTAGTCGAAGACCCGTGGGTGCGAGCGCCTTC
GGTTTCGAATACCTCAAAAGTTCGCTTTGCAACGGCCAGGTTGAGTACAAGTGAGAGGTC
TGGAGGTGTTGGCCAACAAATCTCCTCCACTCCGATCTTGCCGGAGCGCCAGTCCAGCGA
CGAGGGCGAGATCTATTCAGGTTTACCCCAATCCAGGACAGAGAGTCAAGAGGAACTTGA
CCGAATCTCACAGCAACGGCGGAATACCAACTCGCCCGAGCCTTGCCACGAACAACAGCA
AGCGAACCAGAATCATGACCGAATCCGCAATGATCTTGACCTGTTGAGTAGACCGAGTTG
GTGCGATGCAAAGTTTGCGTTGTCACGTGTGCAGCAAGGCAAAGCTGAAGGAAATCAATA
CGCTCTAAAACTGCGTGCCTTCATCCATCGCATCCTCTTCAAGTTGGGATGCTTTATCCA
GCGTAACGCCTTCACTGTACTTTTTGTCGGTCTCATCCTACTTACCGCCTGCTGCATCGG
CCTGAAGCAGGCGCACTTGGAGACTGACATCGAAAAACTCTGGGTCGAAACCAATGGTCA
ACTGCAAGCAGAACTTGATTACGGAAGACGTCAAAGTCAAAGTGAAGGTCAAACCTCAGA
ATCAACTTACAACGCACAACTTCTCATGCAAACCGGCAGCGGCGCGGCCACCGTAGAAGC
TTTGAAGTATCACCTGAAAGCGGCTATGGCGGCAACCGAAGTATCCGTGTATATGTATAA
CCAAACGTGGAGTTTCGAAGATGTCTGCTACAAACATAGTTTGGCTACAACAGAAGAAGG
CAGCATTTTCGCAACCATATTGGACAAACTTCTGCCATGCTTGATCATTGGTCCACTGGA
CTGCTTTTGGGAAGGTTCAAAGATTTTGGGCCCAAAAGTACCGCTTAAGACCATTGATGG
AATTCCCGACATTACATGGAAAACGCTAAACCCACTGGAATTTGTGGACTTGATGATCGA
TACCACAGGCGGCTTATCCAGTTTCACCAAAGAGCTGCGCTCTTACCGGGATCTCATGGT
CCAGGGTGGAATCACAACTGGATATGTGGATCGATGGTGTCTGGACCCTAATGACCCAGA
ATGCCCTGAAACAGCTCCAAACTTCCATTCAAAAGAGCCTCCTAATGTCGTGGAAATTTT
AAACAAAAGCTGTACGGGATTCGCGACTAAACTCATGCGCTGGCCGTTGGATCTTATTGT
CGGCGGTATCGAAAGAAATGCATCAGGTCATCTTACCAGTGCACAAGGTCTTCAAACTCT
GTTTAATTTAATGGGAATTGGAAATATGTTTCAATTTCACGATAACAGCTTCAAAACTCG
GGATATCGACTGGACAAAGGAAACCGCAAAAAACGTCCTTTACACTTGGCAGAGGAAGTA
TGTCAAGAAAATTTATGAACTTCAACAGCCGGAAAACGCAACTGACGAGCAAACGCTGAA
TGCTTTTAGCATCGCCACTGCTGAGGACATACTCGCAAAGTTCTCCAATATACCCCTGAT
ACGAGTGTTGGGAGGCTACCTACTCATGATGGGATACGCCTGTCTCTCGCTCATGAGAAC
CCGAGCCTCCAGGTCGCAGGGTGCTGTGGGACTGATAGGAGTTGTTCTCGTTACCCTCTC
CGTTGCTGCTGGTCTTGGTATTTGTACGGTCATTGGAATCAGTTTTAACGCGGCCTCAAC
ACAGGTCTTACCTTTCCTAATGCTGGGATTGGGCGTTGACGACATGTTTCTTATGGCTCA
CCATTTCGGCGAGATCGCCGTGCTCTCTTACATACCCTTTCAGGAACGTGTTGGAGAATG
CCTGAAGCGGGTGGGAGTGAGCGTTGTTCTCACGTCTATTGCTATTTTGTCGGGGTTCCT
CTTCTCATTGATCATTCCCATGCCCGCTCTGCGCGCCTTTGGGTATCAGGCGTCGATCGT
AACTATCTTCAATCTCGTCTCAGTCCTGGTAATATTTCCTTCAATTCTCAGCTTGGATCT
GAATCGAAGGAAAAACAACAGACTCGACATTCTGTTTTGTTTTGAAAGTTCGACGACAAA
CGAAGTAATAGATTTAAGTGAAGAAAATAATCAACAGCGTGCAGTAAATAACCACGGATG
CAACCAATGTCATCGTCACAACGGACCTTTACCTGTTGACAACAACCACTGTGGCACCAC
GATCACAATGCATCATACAATACAGGCGTACTCCAACGAGTCGTATGTGACTGTCCTTGG
TCCTGCCGCTGCCGGAGCGACTTTTCACGATGCAAGCGGACCAGGTCGACGACCAGGAGA
TATGGATCCCACATATGATTTAACCCGTACACGTAGCCCGCCTCCTCAATACACACCAAA
AGACCAGTCCCCGCCACAAAGACCGAAAGTGGCGTTTATGGATTCCAACGGTGGCCCACC
CACAGCTGAAAGAACTTACGACCGGCCGATAAGATCTACTATCACCCCCGCATCGAGCGT
AAGGACCCTGAGAACAAACGGAAGTAATCCACCGACTAACCTTACCACTCCAATGGAAAG
TGTTCGAAGCTCAACACACAGCCTCGTTCCCAAACGAAGACGATCGTCGTCGTTTCTTTG
TTGTCCAAGGAACAGCAAGCGATGTGGGTCTCTCTACGCCAAACTTGCTGTTCTTCCTAG
TTTGACGCTAAATCAGCTTGGTGAACGATATTATGCACCGTTCCTGATGAGAAAACCCTC
AAGGATCTTCGTGCTGGCACTCTTCGGCGCATTGCTCGGAGCTTCCATATACGGCTGTAC
ACAAGTGAAGGACGGGCTAGATCTTGGCGATGTTCTACCGCGTGGGACTCGAGAACATCA
GGCGATCGTGGCCCAGACAACCTACTTTTCTTTCTATCCTATGTACATCATCACTAAAGA
ATTCGACTATGCCAGACAACAGCGCAATATGTACCGTATTCACGAGCAAGTTGGAAATAT
CAGTTACGTCATGAAACAACCGGATGGAACAGTTATGAAGTTCTGGCTTCACTATTTCCG
AGAGTATTTGGAAGGTCTACAGGCAAGTTTTGATGCCGATTGGCAAGTGGGCAAGGTGAA
CGCTTCTACATGGTCTTCCGACGTAAGCGACAAAACTATTCTGGCCTTTAAGCTGTTGGT
TCAAACCGGTCGTGTTGAAGATCCGACTGATACAGCTCGAATTGGATGCACTCCGATTGG
CTCGAAATGTTCACGGCCGAACCGCGTACGGTTGGTTTCGGACGACGGCATCATCAACGA
GGATGCGTTTTACAACTACTTGTCAGTTTGGTTTACCGATGATCCTCTGGCATATGCCGC
CGCTCAAGCGTCGATATATCCAACTCCCAAAACATTTCAAAGCTCCCGCTACGACCTAAA
CATGATCATTCCGCCTTCTTCTGGCCTTACATATTCGCAAATACCTTTTTATCTGAACGG
GATGCGTGAAAACGAAGACTTTGTTAACGTGATTCGTAGCGTGCGACACATTTGCGAAAC
GATGGCTGCCAATACTGAATTGGACACATACCCAAGTGGCTACCCTTTCACATTTTGGCA
GCAGTACATTGACTTGCGCTTCTGGCTCTTCGTATCCCTCGGTGCCGTTATCGGAGCTGT
GTTTCTTGTTCTGTCATTGGTTCTCTTTAACCCTTGGGCGGCCGGCATAATGGCCCTGTT
CTTAGCAATGATAGCCGCAGAGTTGCTCGGGTTTATGGGTTGGGCTGGTGTTAAACTGAG
CGCTGTCCCGGCTGTCATACTTGTGGCTGCTATCGGCCTGGGTGTGGAGTTCACAGTGCA
CATTACCTTCGCCTACATTACATCATGTGGCACCAGGGAAGAAAGAGTGGCTCGCAGTAT
TGGTCACATGCTTGGCCCTGTTGTCGATGGTTCCATTTCGACCCTTCTGGGTGTGGTTAT
GTTGGCTGGCTCCGAATTCGACTTTATTATTACATACTTCTTCCAAGTTCTCGCTTTCCT
TATTTTGTTGGGAGTCCTAAACGGCCTCATCCTTCTACCAGTCGTATTGTCGCTGATTGG
TCCGCCAGCTGAAATAATCCCAGTTGGAGGCGGAGCTCGGCTCAAAACCCCAACACCACC
CCCTTCGCCACCCGGGGAACTGGCTTGCAACTGCCGGCAGTGCTCGTGTCAGCAGAACCA
TAGCGCCAACACCAACCACAACAACAATAATCGTTGCCAATGCATGCGGTGCTCTCAACA
TCGCGGTAGGGGTGGTAGATATGGCCAACCAACGTCACGCGATGACTTGCAAGTACACAG
GCGATACCAAACACGCCACGATGCTCACGTTTACAGTCAACCTGCGACCGAAAATTACGC
CGGCAGATGGCGCTACCCGGACGCGCACTACGACAGTAGAGTGGACAATGCACGATTCGT
GCGCACGGACGATGTACCAGGGAGGTCGCAGCAATATCACCCTCACTCCATACCTCCTAT
AAATGAGGAGGAAACAAGTCAGGTTTATATGCGCCCGGATTACGTAATGTATTCAAACGG
GAGGAAGCCACCACATACACAAGATATTCACTGTGAGAATTTACAAACTCGATCGGATTT
TCACCCGATTCCACCTGCTGCAGAAGTACCGCGAAATAACGGGCCAAATGTCCGGCAACG
TGGAGCTGGCGACCGTCGGCAACATATCGCCACACTAAGCTCATCTTTAACTGTCAACCT
ACACACTTCAGGAAGGCCGAAGGTGGTGTCATTCGTTGAACCTGGAGGACCTCCGCCGGA
CGTAATTCACCCTAACTACGTATGGCAGAAAGCCAATTACGATGACACGCCCGCACCTCT
TGAACACGGAAGAATGCCTAATCGCCACTTCGACATATCGGCGTTAAACGGCGTAAGCGG
GAACATTGGGGGCACCTAAAACAGTGGAAAGGCTGTAATCTTGACTTTATTCGTAATTCT
ATTTCTTGCACAGTCGACGTTTTATTTATAAAACACACCAGTAACCATCGTTATCATATA
CAACATGCAATGCGCGATCCACTTGAATATGAACGCTCTTTAGTGCCACAAAGTATTAGG
AGGCTTCGATACGCGGTCGAAACATGAATTTTTAATGCAGCATTTGAGCGCTCCAAGGTA
TAAATCTGATCTTCAACATGCTGCTATGTCGAAGCAGCGTTGCAAATTTGTACAAGGTGT
ATTTGGTGTTTGTATACCCATGCTAAACAGCAACGGAGCTTTGCAACATAGTTTTAAGCT
GCTTGTATTTAATTTTTTGGCTATTTTGTTAAGTTTCGGTCTTGATTGAAGTTCCCTAAA
GTTGAACTATGGCACAAATCATTTTTAACACAATCATCCAGCTTTAATGATAAATCGACA
ACGTGTTGATGAGAAAAGCAATCATAATGGTCACTGCCACAACCATGCAATCGTCGAAAC
ATGCTTTAATCAAGTCACAAAAATCATTCATTGCAATGCCTTTTCGCAAATTCTGTTGTT
TTTTCTACGCTTGCGCAAGCTCCCAAGCCCTCTATTCCCAAAGCTGTACAATAGTCGTTA
TGTTTTTACGCGCTTTCCCACTCGACAACTTACAGACCGCTGCTAAGCGCTTGTCGCGTT
TTTATTTTATTTATTAATCCCCGTGTGGTATTTGCGTCCAACCTGTCTTTGATGCGTCGT
TCTTCACGTTACAATGGCCACGGATCGAAATGCGAGCGCCGTGCGTTTTGTTATCTATAC
TTTTTCATTCATTTGAAATATAATGTCGTTGTGTACGAGCCAAATATACCTCATTACATC
CACAAAACGCTGTGTGCAGCAACG
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPC1_HUMAN | 25.347 % | 116 | 7.35E-26 |
| PTC2_HUMAN | 42.492 % | 502 | 2.38E-152 |
| PTC1_HUMAN | 46.844 % | 557 | 4.42E-170 |