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  1. Transcript 'Cisavi.CG.ENS81.R417...'
  2. Transcript 'Boleac.CG.SB_v3.S106...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1072.g13541.01.t

Possible name(s)

CHPF; CHSY1; CSGALNACT2

Location

S1072 [25,448 / 27,733]

Sequences

Amino acid sequence

Length: 472

>Phmamm.CG.MTP2014.S1072.g13541.01.p
MKLLKCKNPNIPRIIGGILLGFFSRIVYEQVASTTRLTNKKSLSLAQDQQDANCPPCQQE
VCPKCLPESVTGTVPTDALPVYKPKGMYEVTRWLYFDENNVYDIINEEPKVALNGHWRED
IKAVSQVGLEYINANKMLGHSWALVSLKNGYMRTDSLRGTDYMLDLIVRPTTLNSTKSVY
DRTFRVRMVHPFENIDNSRSISVRKEIQGKIKIIVPTSYKSTNVENFLDGYNKGNYDDQI
ELIFMLFIGNQLEERKQAKALLDRISMKTNVKNIIKAVQIEGQYDFLKGIHYGAVKSANS
KDIIIAVNEEKEFSHQFLVHCRAIAEAGKRVYFPIAFEQYDPDVIEKGMPPGKPKNVNKK
DHNKFTGYWSHDAHDSICAYQADFISVLSGATTNQEKPGTWLYDIFLRKGMDVFAAVEPH
LFRMHTAKTCDKIKLSADAFQKCFIDKAKTLGSKPALGILYITEIVQKKVKH

Nucleotide sequence

Length: 2,088

>Phmamm.CG.MTP2014.S1072.g13541.01.t
GCGAGCACGGCTTGGCTTGCGCATGTGCTGTTATTGTGTGTGCGGGCGCTGAGGGCTCCT
TTTTCTTGTTGTTTAGTTTGCCGAAGGTAGTCATTGACGAGCCGTTACCACTGGCGCACG
GTTCAGCGTGTACTGTGTAGTAACTGGCAACATGTGTGCTTTTAGGTAGAGAAATTAGTT
TTGCTTGGGTTTGCTTTACATCGAGCTGACAGATGATCAACTGAACTGAATTTAAACAAA
GACTGTTTGATATGATTTGGGAACATAGTTCTATTTTATGCTTCATAGCTTTGTAGCGTT
TGTAGTTACATATTCAGGCAGTGTAAACGTGATTTTTCTGCAGGTTGAAGTAGTCTTGGG
TCTTAACCTAACTTCTCATAATCTTTTGTTTAGCTGCAAAAACAATGACCAGGTAACAAC
AAGTTTCTGCTGAGCTGAATATGGGCAGTACTGTTAAAAAAGATTGGTTGAAGAATGAAG
TTGCTTAAATGCAAGAACCCAAACATTCCTCGCATAATCGGAGGGATATTGCTCGGGTTT
TTCAGTCGAATTGTCTATGAGCAGGTTGCCAGTACTACAAGACTAACAAACAAGAAGTCA
CTGTCACTGGCACAAGACCAACAAGATGCCAACTGTCCACCCTGTCAGCAGGAGGTTTGC
CCTAAATGCCTACCAGAGAGTGTCACCGGTACTGTGCCCACTGACGCACTGCCAGTTTAC
AAACCAAAAGGCATGTATGAGGTGACACGCTGGCTCTATTTTGATGAAAACAATGTGTAC
GATATCATCAACGAAGAGCCTAAAGTCGCTTTGAATGGACATTGGCGCGAGGATATTAAA
GCTGTATCCCAAGTCGGACTGGAGTACATCAATGCAAATAAAATGCTTGGACATTCCTGG
GCACTTGTTTCCCTTAAGAATGGATATATGAGGACAGACTCATTGAGAGGGACAGACTAT
ATGCTTGACCTTATTGTCAGGCCCACAACTTTGAATAGCACTAAATCTGTTTATGACAGG
ACGTTTAGGGTAAGAATGGTCCACCCATTCGAGAACATTGATAATTCCAGAAGCATTTCA
GTGCGGAAAGAAATTCAAGGGAAAATAAAGATTATAGTCCCAACATCATATAAATCGACC
AATGTTGAAAATTTCCTTGATGGATACAACAAGGGAAATTATGATGATCAAATAGAACTT
ATATTCATGCTATTTATTGGAAACCAACTTGAAGAAAGAAAGCAAGCAAAGGCACTTTTG
GATAGAATTTCAATGAAAACCAATGTTAAAAACATCATTAAGGCAGTCCAAATAGAAGGT
CAATACGATTTTCTAAAGGGAATTCACTATGGAGCTGTAAAGTCAGCCAACTCCAAAGAC
ATAATAATCGCAGTCAATGAAGAAAAAGAGTTTTCTCATCAATTTCTGGTGCACTGTCGG
GCAATTGCTGAAGCAGGCAAAAGAGTGTACTTTCCAATTGCTTTCGAACAATACGATCCA
GACGTAATAGAGAAGGGTATGCCACCTGGCAAGCCAAAGAATGTTAACAAGAAGGACCAC
AACAAATTCACTGGATACTGGTCGCATGACGCACATGATAGTATCTGTGCATATCAAGCT
GACTTCATAAGTGTCCTTTCGGGTGCAACGACAAATCAGGAAAAGCCTGGCACTTGGCTT
TATGATATATTTTTAAGAAAGGGTATGGATGTTTTTGCTGCTGTGGAACCACACCTATTT
CGAATGCACACTGCGAAAACATGTGATAAAATTAAACTGTCCGCTGATGCCTTTCAAAAG
TGTTTTATTGACAAAGCGAAAACGCTAGGGTCAAAACCGGCCCTTGGTATTTTATATATC
ACTGAAATAGTGCAGAAAAAGGTGAAGCACTAAATTTAAAGACTGTAACATATTTTTTTC
ACTGTGGCATTCAAGTGCACCTATTGTAAATTGAACTTTGGTGTTAGGTTTAGGAAATGT
TTGCTTTTTTTGTTTTTTTGCTCATGATTTGTAATCCATATGTTATTTATTTGTTGAAGT
ATGCTTTTCGTCGTACTTGGATTTACAAAATAAATTTTTATTCAAATG

InterProScan

Pfam
Chond_GalNAc (IPR008428) - T[76-457] 5.0E-62

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS1_HUMAN 21.596 % 92 9.9E-20
CGAT1_HUMAN 24.242 % 88.2 1.27E-18
CGAT2_HUMAN 26.061 % 96.3 3.34E-21