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TRANSCRIPT CARD

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  1. Clone 'cign013p17'
  2. Clone 'ciht012f03'
  3. Clone 'AHC0AAA202YN15'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1075.g13550.01.t

Possible name(s)

Phmamm.CG.MTP2014.S1075.g13550

Location

S1075 [19,115 / 22,047]

Sequences

Amino acid sequence

Length: 730

>Phmamm.CG.MTP2014.S1075.g13550.01.p
MIPQFKNFALELKSHCEKCGNNKMKEKNVKDSALVLHKIGKQYHKLAACNTDQRDQKFNL
IRSGVLYNAAIVRKPDNAAEMKKDLCNLCSFILQLAGAQRNDADLVNQAGIFFTQVEEMR
DLVNRKVTSRCLDLNPQQFNSNTTINLNNQISTMYSSMMKIIMEFCVDVKGPPPCQYALV
GMGSIARKEITPYSDFEHIYVLEEGIQCRADYDDILDYFRWVTVLFQMILINMQETIIPH
VSLPYINDHKTEDWFYDVVTPKGICFDGMVPFACKFPLGFSGTPSKPWEIELIKPVSEMA
GYLEKDEDLKNGYHLADMLANTCFISGSTLVYEHFTTDAQSVLLNHISIAQTQKILSEDL
EQFQLIFNLFGLSHRKPINIKRVLYRNVTVFVAALGRKYGITGCSSFSIIQQLMTTGKLS
THLGNQLLFAINIACDVRLKFYSQFYRQRDENSGIAVMEFVGLRRLITFFKIVGKLKSLV
SNEFSIEIRGQSRFESIFIPAFFGSNKTARKLQLLRMKGNEDDFEVFWHFIFDVLWFIVF
LGYTKSLDDDKKDVLKTVVILNIAYELARFGAFSSAKSYLKLLPQTEEFKDCGLLLEFCE
TFKSMGMNLFGYEYYAEASKYFQKEAVVRSRFQKQTTLEVCESYRNLGHCLYMAGDYQNA
VIYFKKISQDGETQDGETICTHFQQSLLGVHKKEMPTETPCCPLVSNKQNDEDRKKIQQF
IASYDNTTQF

Nucleotide sequence

Length: 2,193

>Phmamm.CG.MTP2014.S1075.g13550.01.t
ATGATACCACAATTTAAGAATTTTGCTCTTGAATTAAAGTCACATTGCGAAAAATGTGGA
AACAACAAAATGAAAGAAAAAAATGTAAAAGATTCAGCACTTGTTTTGCACAAAATTGGA
AAACAGTACCATAAACTAGCTGCATGCAACACTGACCAACGGGACCAAAAGTTTAATTTG
ATTAGAAGCGGAGTTCTGTATAATGCAGCAATTGTTAGAAAACCGGACAATGCAGCTGAA
ATGAAAAAAGATCTTTGCAATCTTTGCTCCTTTATCCTTCAACTTGCAGGAGCGCAAAGA
AATGATGCCGATTTAGTAAACCAAGCAGGTATATTTTTTACACAAGTGGAGGAAATGAGA
GATTTGGTAAACAGAAAAGTCACGTCTCGATGTTTAGATTTAAATCCACAGCAATTTAAC
TCAAATACAACTATAAATCTAAACAACCAAATCTCAACCATGTATTCTTCAATGATGAAA
ATCATCATGGAGTTTTGTGTAGATGTAAAAGGTCCACCACCATGTCAGTATGCATTAGTT
GGAATGGGTTCCATTGCAAGAAAAGAAATCACTCCATACTCTGATTTTGAACACATTTAT
GTGTTGGAAGAAGGAATTCAATGCCGTGCAGATTATGATGATATACTTGATTACTTTAGG
TGGGTAACAGTTTTATTTCAAATGATATTAATAAACATGCAAGAAACTATTATTCCTCAT
GTGTCCTTGCCTTACATCAATGACCACAAAACTGAGGATTGGTTTTATGATGTTGTCACC
CCCAAAGGAATATGTTTTGATGGCATGGTTCCTTTCGCTTGTAAGTTCCCATTGGGATTT
TCTGGAACTCCAAGCAAACCCTGGGAAATTGAGTTAATCAAACCTGTGTCTGAAATGGCT
GGGTATTTAGAAAAAGATGAAGATTTAAAGAATGGATACCATCTTGCTGATATGCTGGCA
AACACATGTTTTATCTCTGGATCAACACTTGTTTATGAACATTTTACTACTGATGCCCAA
TCTGTCTTACTAAACCATATATCTATTGCACAAACTCAAAAAATTCTTAGCGAAGACCTG
GAACAATTTCAGCTCATTTTTAATCTCTTTGGTTTATCACATCGCAAACCTATAAACATC
AAACGTGTCCTCTATCGCAATGTGACAGTTTTTGTTGCAGCACTTGGGAGAAAATATGGA
ATTACTGGTTGCTCATCATTTAGCATAATACAACAACTCATGACCACTGGAAAATTGTCA
ACACACCTTGGAAACCAATTGCTGTTTGCCATTAATATTGCTTGTGATGTAAGGCTAAAA
TTTTATTCTCAGTTTTATAGACAGAGAGATGAGAACAGTGGCATTGCCGTAATGGAATTT
GTTGGTCTTCGCAGACTGATCACATTCTTTAAGATTGTAGGAAAACTAAAGTCTCTGGTG
TCAAATGAGTTTAGCATCGAAATACGAGGCCAAAGCAGATTTGAAAGCATATTTATTCCC
GCCTTTTTTGGGTCAAACAAAACAGCAAGAAAGCTACAGCTGCTTCGCATGAAGGGTAAT
GAAGATGATTTTGAAGTATTTTGGCATTTCATATTTGATGTTCTATGGTTTATTGTTTTT
CTTGGCTACACCAAGTCACTTGACGATGACAAAAAAGATGTATTAAAAACAGTGGTGATA
CTTAATATAGCATATGAACTTGCCAGATTTGGGGCATTCTCCAGTGCTAAATCCTACTTG
AAATTACTGCCACAAACAGAAGAATTTAAAGATTGTGGTTTGTTACTAGAATTTTGCGAA
ACTTTTAAATCAATGGGAATGAATTTGTTTGGTTATGAGTATTATGCTGAAGCATCAAAA
TACTTTCAAAAGGAAGCTGTCGTTAGGTCACGCTTCCAGAAACAAACAACTCTGGAAGTT
TGTGAAAGCTATAGGAATTTAGGTCATTGCCTTTACATGGCTGGTGACTATCAAAACGCT
GTGATATATTTTAAAAAAATTAGCCAAGATGGTGAAACCCAGGATGGTGAAACAATTTGT
ACTCACTTTCAACAAAGTTTGCTTGGCGTTCATAAGAAAGAAATGCCAACAGAAACTCCT
TGCTGCCCATTGGTATCCAACAAGCAAAATGATGAAGATAGAAAAAAAATTCAACAGTTC
ATAGCCAGCTATGATAATACAACACAATTCTGA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[145-211] 5.0E-7
Pfam
DUF294_put_nucleoTrafse_sb-bd (IPR018821) - T[373-484] 5.7E-5
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[556-670] 1.3E-6
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[597-667] 8.22E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value