- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S107.g03352.01.t
Possible name(s)
PITX1; PITX2; PITX3
Gene model
Location
S107 [146,345 / 152,704]
Amino acid sequence
Length: 492
>Phmamm.CG.MTP2014.S107.g03352.01.p
MRRPCKARHIGLLERYSDDEGPPLRVVLFMVTVEYDVIYDSYMQMCTILFQFTAEQPSNY
NYYAYHNNGYINGFSNGSPSSSPTSNPPAIFGSSSSSQYGLSQNNGATSPFAANGLSRYA
GKFSTGFSKLNNSVSATTVSPLHPGSGLASLVASGSTYATAVRDSAETANSKLSRQSDTS
CDDNSKNYFDESCEKDKDTFCGKSKDVHHTTPSPSKSIESTESSIIEDEMADKQAGDLGG
ASSPGEDKKKTGAATDGEKNNTDNACSDDGCAEGGDNNRRRQRRQRTHFTSQQLQELESV
FSRNRYPDMTTREDIARWTNLNEARVRVWFKNRRAKWRKRERNQLNDFKGFGQFNTFISP
YDSDSLYHGYNWASKMTAAGGTLGGKTFPWGLNSHINPLTTQALGFHNPSPMATSIAANS
VMPNMNMGNGLTGLGAAGSTNANPACHYNPGVSPYMYRNGTDPCSSSITSLRMKAKQHST
PYFGYPSCEYAP
Nucleotide sequence
Length: 1,479
>Phmamm.CG.MTP2014.S107.g03352.01.t
ATGCGCAGACCTTGCAAAGCGAGACATATCGGGTTACTGGAGAGATATAGCGACGATGAA
GGGCCACCTTTACGAGTTGTGTTGTTTATGGTTACTGTCGAGTACGATGTTATTTATGAC
TCTTATATGCAAATGTGCACAATTTTGTTTCAGTTTACAGCTGAGCAGCCCTCGAATTAT
AACTACTACGCCTACCACAACAACGGCTACATCAACGGGTTTTCCAACGGTTCGCCATCA
TCTTCACCTACGTCAAATCCACCGGCGATTTTTGGGTCGTCTTCGAGTAGCCAATACGGT
TTGTCACAAAACAACGGTGCCACATCCCCGTTTGCAGCAAACGGTCTTTCACGGTACGCC
GGCAAATTTTCAACGGGATTTTCAAAACTGAACAACAGCGTCTCTGCCACCACTGTGTCT
CCCCTGCACCCGGGCAGCGGCCTGGCGTCCCTTGTGGCGTCCGGTTCTACATACGCCACA
GCGGTTAGGGACAGCGCCGAAACGGCAAACAGCAAACTTTCGCGACAGAGCGACACTTCT
TGTGACGATAATAGTAAGAATTATTTTGACGAATCTTGTGAGAAAGACAAAGACACTTTC
TGTGGAAAATCAAAAGACGTTCACCACACCACTCCATCGCCGTCCAAAAGCATTGAATCT
ACCGAATCGTCGATAATAGAAGACGAAATGGCGGACAAGCAAGCTGGAGATCTTGGGGGC
GCTTCAAGTCCTGGGGAAGATAAGAAAAAGACCGGAGCAGCTACAGATGGTGAAAAGAAC
AACACAGATAATGCTTGCAGTGATGATGGATGCGCTGAGGGCGGAGACAACAACAGGAGG
AGACAGAGAAGACAAAGAACTCATTTTACATCCCAACAATTGCAAGAACTTGAATCAGTG
TTCTCAAGAAATCGGTATCCTGATATGACAACGCGTGAAGATATTGCTCGTTGGACCAAT
CTCAACGAAGCAAGAGTGCGGGTTTGGTTCAAAAACCGACGGGCAAAATGGCGCAAGCGC
GAACGAAACCAACTCAACGATTTCAAGGGTTTTGGTCAGTTCAACACCTTTATATCGCCA
TACGACAGCGATTCACTGTACCACGGGTACAACTGGGCGAGCAAAATGACTGCAGCTGGC
GGGACCCTGGGTGGCAAAACCTTTCCATGGGGTCTCAACTCACATATTAACCCTTTAACG
ACCCAAGCTCTGGGGTTCCATAACCCTAGCCCCATGGCAACCAGCATCGCAGCAAATTCA
GTGATGCCCAATATGAACATGGGTAACGGACTGACTGGATTGGGCGCAGCGGGCTCTACA
AATGCCAACCCCGCATGCCACTACAACCCAGGTGTTTCCCCGTATATGTATCGAAACGGC
ACAGATCCATGTTCGTCATCAATTACGTCACTGCGCATGAAGGCCAAGCAGCATTCGACA
CCCTACTTTGGCTATCCGTCGTGCGAGTACGCGCCATAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[273-342] 2.61E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[280-340] 20.811 |
| SMART |
Homeobox_dom (IPR001356) - T[282-344] 1.7E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[283-339] 2.6E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[287-341] 3.98971E-22 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[315-338] . |
| Pfam |
OAR_dom (IPR003654) - T[462-480] 2.0E-9 |
| ProSiteProfiles |
OAR_dom (IPR003654) - T[466-479] 12.323 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PITX3_HUMAN | 40.667 % | 180 | 5.88E-53 |
| PITX2_HUMAN | 44.257 % | 203 | 1.42E-61 |
| PITX1_HUMAN | 43.729 % | 177 | 1.05E-51 |