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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.42.v2.A...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. EST 'AHC0AAA224YO03_RM1' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1085.g13599.02.t

Possible name(s)

TMED10; TMED4; TMED9

Gene model

Phmamm.CG.MTP2014.S1085.g13599

Location

S1085 [30,519 / 31,170]

Sequences

Amino acid sequence

Length: 216

>Phmamm.CG.MTP2014.S1085.g13599.02.p
MKLSLCLCFLAYLHLSSAVYFHIGEKEKKCFIEELPEDTMVTGKYKAQLWDKRSNNFLDS
PPGMGMHVEVKDPNNKVLLSKTYGSEGAFTFTSHTPGEQQICIHSNSTKWSLFAGGKIRV
YLDIQVGEHTNDYGKIAEKDKLTELQLRVRQLLDQVEQIQKEQNYQRVRESRFRQTSEST
NSRVLWWSLAQTCVLVLAGVWQMRHLKGFFEAKKLV

Nucleotide sequence

Length: 651

>Phmamm.CG.MTP2014.S1085.g13599.02.t
ATGAAGTTATCACTGTGTTTGTGTTTTCTGGCATACCTTCATCTGTCATCTGCAGTTTAC
TTTCATATTGGAGAAAAAGAAAAGAAATGTTTTATAGAAGAACTTCCAGAGGACACCATG
GTGACGGGAAAATATAAAGCACAGTTATGGGACAAGCGCTCAAACAACTTTCTTGACTCA
CCACCTGGCATGGGAATGCATGTTGAAGTCAAGGACCCTAACAACAAAGTACTTCTTTCC
AAAACATATGGATCAGAGGGAGCTTTTACTTTCACATCTCATACTCCTGGAGAACAACAA
ATCTGCATTCACTCAAACTCCACAAAATGGTCCCTGTTTGCCGGTGGAAAAATTCGTGTG
TATCTAGATATCCAGGTTGGGGAACACACAAATGATTATGGAAAGATTGCTGAAAAAGAC
AAACTGACAGAGTTGCAACTCCGTGTAAGACAGTTGCTTGACCAAGTGGAGCAAATTCAA
AAGGAACAAAACTATCAAAGAGTTCGTGAAAGTCGCTTCAGACAAACCAGCGAAAGTACC
AACTCCAGGGTTTTGTGGTGGTCACTTGCTCAAACTTGTGTTCTGGTTTTGGCTGGAGTT
TGGCAGATGAGGCACTTAAAGGGATTCTTTGAGGCGAAAAAACTTGTTTAA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[10-216] 8.2E-115
SMART
GOLD_dom (IPR009038) - T[18-211] 6.4E-78
Pfam
GOLD_dom (IPR009038) - T[18-211] 2.6E-54
ProSiteProfiles
GOLD_dom (IPR009038) - T[28-149] 16.775

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED9_HUMAN 70.833 % 323 1.33E-113
TMED4_HUMAN 73.632 % 328 1.52E-115
TMEDA_HUMAN 32.673 % 108 1.91E-29