Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C13.127.v1...' > 
  2. Clone 'ma315m01' > 
  3. Transcript 'Moocul.CG.ELv1_2.S81...' > 
  4. Transcript 'Moocul.CG.ELv1_2.S12...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1086.g13609.01.t

Possible name(s)

RAPGEF1

Gene model

Phmamm.CG.MTP2014.S1086.g13609

Location

S1086 [29,012 / 38,677]

Sequences

Amino acid sequence

Length: 881

>Phmamm.CG.MTP2014.S1086.g13609.01.p
RHRHDKIKPSPSGSQEDLTRPDGCLKHKDTDENKLHDLCKEVKVGLMYFEAIIAKKRVEQ
FSGSASQVLEVVINILDQLARIQYAPELSTVLMSCRSNVIQKVADLIHWSDKMLLESKEE
QENNFKAAPQIIGFVQKGVDELVNEAVNKIRARNSAPTTPTNRAVSSMSGFNHIGADSEY
SQLPSGDDIRRVPPIPPKKRSSMPKPVGIVAPFNASQDAAANVLGVQGLTRSEESLLGHH
DFYQLQGQFSSHIYESGDRTSFCSSNMSTDTSDSIDALANGEASNIAQNILRWHNIEQPN
NTGDYEELLSRITTDSNSSDQKLSVPGSPIKDRPTSCPNAYIPISPLRPNSNGSWQEDTM
SQQSLNDSDNNIPPTLPVKKNKKPFSRHDLSESTETLTDDEEVPPLPVKKNKIDLYMQFV
HSSQAQPPPMSDISRETARRYNQRDSLVSSPGARRYASQRQSIDSPVTGQRFEDSISQTS
AQFSRVLSLKSNVSTVSSEDDQSSLPSTQPSPQNTRHSGVSSGYWTPLHASETSLSSLQE
QQDQVQSAQTLPVLPETPPSLPPKKTRLSVRRCNSLSSPHSGSSTETTATPLTAKENSRY
RVNDDQVSHVFTFPPVSNDESHVTRQPPPLLPKRSSLGVRRTSAQNHNQRQRSWNGGTSP
PPLPSHASVDVVDSTVHVNTWQFAQQGPVTLPESHSAPPLPRKTTARVSPTVHINGTALS
RDSGHVSVTSETEASFPVDLSPDHTAQSAETEPDKEPSPQNGDNHTNGKDVKSKEQQEEE
EGQSSPKSRRGQSTDRGCSLPPDDPGNLLDMIDVSSYLSVHRHSEQSLPEVCSACVDALI
VYAAELNKKSLIYYEAFLTTYRSFITPLELLKKLLYRYPLH

Nucleotide sequence

Length: 2,753

>Phmamm.CG.MTP2014.S1086.g13609.01.t
AGCGGCATCGTCATGACAAAATAAAGCCATCTCCCTCAGGCAGCCAAGAAGACCTAACCA
GGCCTGATGGATGTTTAAAACATAAGGACACCGATGAAAACAAGCTTCATGATCTGTGCA
AGGAAGTAAAAGTGGGACTGATGTACTTTGAAGCAATTATTGCCAAAAAGCGAGTGGAAC
AGTTTTCTGGTTCTGCCTCTCAAGTCTTGGAAGTTGTAATCAACATATTGGATCAACTTG
CCAGGATACAATATGCTCCAGAGTTAAGTACGGTGCTTATGTCCTGTCGAAGCAATGTAA
TACAGAAAGTAGCAGATCTGATACATTGGTCAGACAAAATGCTGCTGGAATCAAAAGAGG
AACAGGAAAACAACTTTAAGGCAGCCCCTCAAATCATTGGTTTTGTGCAAAAGGGCGTTG
ATGAACTGGTCAATGAGGCTGTTAACAAAATACGAGCACGTAACAGTGCACCAACCACAC
CAACAAATAGAGCAGTGAGCAGCATGTCTGGGTTTAACCACATTGGAGCTGATTCTGAAT
ATTCCCAGCTGCCATCAGGTGATGATATTCGAAGGGTGCCCCCTATACCTCCTAAAAAGC
GGTCTAGCATGCCAAAACCTGTGGGCATTGTTGCACCTTTCAACGCTTCCCAAGATGCAG
CAGCAAATGTCCTGGGAGTACAAGGTCTTACTCGGTCAGAGGAATCACTCCTTGGCCACC
ACGATTTTTACCAACTTCAGGGACAATTTTCCTCTCATATCTATGAGTCTGGGGACAGAA
CAAGTTTTTGTTCCAGCAACATGAGTACAGACACTTCTGATAGTATTGATGCACTTGCTA
ATGGTGAAGCATCCAACATTGCACAAAACATACTGCGCTGGCACAACATTGAGCAACCTA
ACAATACTGGGGATTATGAAGAACTACTTTCTCGTATCACAACAGACAGCAACAGCTCTG
ATCAAAAGTTATCTGTCCCTGGTTCTCCGATAAAAGATCGACCCACCTCTTGCCCTAATG
CCTATATTCCAATTAGTCCACTTCGTCCAAATTCAAATGGGTCATGGCAAGAAGACACAA
TGTCACAACAATCACTAAATGACAGTGACAATAACATACCACCAACATTACCTGTTAAAA
AGAACAAAAAGCCATTTTCACGACATGACTTGTCAGAATCCACAGAAACCTTAACTGATG
ATGAGGAAGTTCCACCTTTGCCTGTGAAAAAGAACAAAATCGACCTCTACATGCAATTCG
TACACAGCAGCCAGGCGCAACCGCCGCCTATGTCGGATATATCGCGGGAGACCGCTCGTC
GTTACAACCAGCGTGATTCACTCGTTTCCTCGCCGGGTGCTCGTCGTTACGCGAGCCAGA
GACAATCCATTGACAGCCCGGTTACAGGTCAGCGATTCGAAGACAGTATTTCGCAAACCT
CTGCCCAATTCAGCCGGGTCCTTAGCCTCAAATCTAACGTATCCACTGTTTCGTCTGAAG
ATGACCAGTCCTCACTGCCCTCAACACAGCCGTCTCCTCAAAACACTCGCCACTCTGGAG
TATCGTCCGGTTACTGGACTCCCCTTCACGCTTCAGAAACCAGTTTGTCCTCTCTACAGG
AACAACAAGATCAAGTGCAATCAGCTCAAACCCTACCCGTCCTTCCTGAAACTCCACCGA
GTTTGCCCCCAAAGAAAACTCGTCTGTCCGTCCGCCGTTGCAACTCCCTGTCCTCCCCAC
ACTCCGGCTCCTCAACGGAAACAACCGCCACTCCGCTCACAGCAAAGGAAAACTCTCGAT
ACAGGGTCAACGATGATCAAGTTTCTCACGTTTTCACCTTTCCTCCCGTCTCAAATGACG
AGTCGCATGTCACGCGGCAGCCCCCGCCTCTCTTGCCAAAACGAAGCAGCCTCGGTGTTC
GGCGGACATCCGCACAAAACCACAACCAGCGTCAGCGGTCCTGGAACGGAGGGACTTCCC
CTCCGCCGTTGCCAAGTCACGCATCTGTTGACGTTGTGGACTCGACAGTACATGTCAACA
CCTGGCAGTTTGCCCAGCAAGGCCCTGTGACACTACCGGAATCGCATTCGGCGCCGCCAC
TGCCAAGAAAAACAACAGCCCGCGTTTCGCCCACGGTCCATATTAACGGTACTGCGTTAT
CGCGTGACTCCGGGCACGTTTCTGTGACATCTGAAACAGAAGCGAGTTTTCCTGTTGACC
TCAGCCCCGACCACACTGCCCAAAGCGCGGAGACGGAACCAGATAAAGAACCCAGCCCAC
AGAACGGCGACAACCACACAAACGGTAAGGATGTAAAAAGCAAAGAACAACAAGAGGAAG
AAGAAGGGCAGTCTTCACCGAAAAGTCGACGCGGCCAGTCCACAGATCGGGGTTGTTCGT
TGCCTCCCGATGACCCTGGTAACCTTCTTGACATGATTGACGTGTCAAGTTATCTCAGCG
TTCATCGTCACAGCGAGCAATCACTTCCAGAAGTTTGCTCGGCCTGCGTGGATGCTTTGA
TCGTCTACGCTGCCGAATTGAACAAAAAGAGTTTGATATACTACGAGGCGTTTCTCACCA
CATACAGATCATTTATCACTCCCCTGGAACTACTGAAGAAACTACTTTATCGATATCCTT
TGCATTAGAATTCGTGTGATTATACTTCACTTGGAATAATGTTTACAATTTAGAAGCTGA
TATTAAACCGACTACATTCACTAATCATAAGGTTTAAAATAAGAAAAGGTACG

InterProScan

SUPERFAMILY
Ras_GEF_dom_sf (IPR023578) - T[811-881] 9.81E-11
ProSiteProfiles
Ras-like_Gua-exchang_fac_N (IPR000651) - T[827-881] 17.056
Pfam
Ras-like_Gua-exchang_fac_N (IPR000651) - T[833-878] 2.1E-8
CDD
Ras-like_Gua-exchang_fac_N (IPR000651) - T[836-878] 4.81243E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value